Cucurbita pepo subsp. pepo (vegetable marrow): 111808235
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Entry
111808235 CDS
T05351
Name
(RefSeq) alkylated DNA repair protein alkB homolog 8-like isoform X1
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111808235
Enzymes [BR:
cpep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
111808235
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
111808235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_31
Methyltransf_12
MetW
Ubie_methyltran
Methyltransf_9
DUF2226
Nup96
Motif
Other DBs
NCBI-GeneID:
111808235
NCBI-ProteinID:
XP_023549866
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Position
LG13:9100180..9103871
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AA seq
392 aa
AA seq
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MPQASYWASRVSKRFCRTSKIFGLSSVVSGSGHHCRLFSAMKEIKVKGGSNADPHLLNDE
AHAPQLSCATQGCSASNVQCTPEIEKKYVHRVYDAIAPHFSSTRFAKWPKVASFLSSLPR
GSLILDAGCGNGKYLGFNLNCFFIGCDISPQLIKICNERGHEVLVADAVNLPYRTGFGDA
AISIAVLHHLSTENRRKKAIEELLRVVKKGGLVLITVWAVEQEDKSLLTKWMPLSEKYVE
EWVGPGSPRVRSPSSLALESIPEMNENNSGTCLKDSKVNFTGSMPENIPLPSQSGNDFAN
CNDENLWKTQQEYFVPWHLPYHRAEVSGTSAGALASGLAKKDDKKAAVVYNRYYHVFSEG
ELERLVSGMDNAVVVDRFYDKSNWCIVLEKTM
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagcctcttattgggcttcaagagtgagcaaacgcttctgtcgtactagcaag
atctttggtttatcatctgttgtaagtggtagcggacatcattgtagacttttcagtgct
atgaaagagattaaagtgaaaggtggtagtaatgcagatcctcatctgttgaacgatgaa
gcacatgcaccgcaattgtcttgtgcaacccagggatgttcagcatcaaatgtgcagtgc
acccctgaaattgaaaagaagtatgtgcatcgtgtttatgatgcaatcgctccccatttt
agttccactcgatttgcaaagtggccaaaagttgcatcattcttatcctcattacctcga
gggtctctcatactggatgctggttgtggtaatggaaagtacttgggttttaatctcaac
tgcttttttattggatgtgatattagtccccaacttatcaaaatttgtaacgaaagagga
catgaagttttggtagctgacgctgtaaatcttccttacagaactggttttggcgatgca
gcaatctctatagctgtattacatcatctgagtaccgagaacaggaggaagaaagcaatt
gaagaattattacgtgttgtcaaaaaaggtggcctagttttaataacagtctgggctgtt
gaacaagaggacaaatctttattgacgaaatggatgccactttcagagaagtatgttgaa
gagtgggttggacctggcagtccccgtgttcgtagtccatcgtctttggcacttgaaagc
attcctgaaatgaatgaaaataattcaggtacttgtctaaaggattccaaggtaaacttt
actggaagcatgccggaaaatatacctctaccctctcaaagtggaaatgattttgccaat
tgcaatgatgaaaatttatggaagacccaacaagagtattttgtcccatggcacttacct
tatcatcgtgcagaagtcagtggcacgtctgccggtgcccttgctagtggtttggcaaag
aaagatgacaagaaagctgctgttgtctataacagatactatcatgttttcagcgaaggc
gagcttgaaaggttggtttctggtatggacaatgcagtagtggtggatcgattttatgac
aaatcaaactggtgtatagttcttgagaagacgatgtga
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