Cucurbita pepo subsp. pepo (vegetable marrow): 111808259
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Entry
111808259 CDS
T05351
Name
(RefSeq) uncharacterized protein LOC111808259 isoform X1
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111808259
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
111808259
Prokaryotic type
Methyltransferases
111808259
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Ras
Roc
AIG1
Dynamin_N
GTP_EFTU
HopBA1
MCM
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-GeneID:
111808259
NCBI-ProteinID:
XP_023549904
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Position
LG13:5690093..5693888
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AA seq
563 aa
AA seq
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MALLPGFRHFVTHFCRTTPPMPFLLTHFYTPISRPSSLFHIPNPSCPVLPKALIKPHASG
KKTTFFLSRDERLEDSHAGIEREQIENSSTIAAIVTSMGGPPAAVGIVRLSGPRAVKIVG
SLFCPAAKKKGKNVSQQHPWRPTSHVVEYGVVLDQQGDVIDEVLTVPMLAPRSYTREDVI
EIQCHGSEVCLRRVLKACLEAGARLAEPGEFTLRAFLNGRLDLSQAENVGKLISAKSTAA
ADAALAGIQGGFSSLVKLLRTQCIELLTEIEARLDFDDEMPPLNLETIMEKVHAMAQEVE
TALETANYDKLLQSGIQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEANVTV
SGIPVTLLDTAGIRETDDIVEKIGVERSEAAALGADVIIMTISALDGWTAEDTVLLDSIL
AKKKSDGSSTPILLVINKIDCAPSAANMDAISINRDSFSKQVFTCAVTGQGIEHLEMAIS
ELMGLNNTLASGRRWTVNQRQCEQLLRTKEALGRLKSSIEEELPLDFWTVDLRGAVLALG
EISGEDISEEVLSNIFGKFCIGK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcttccaggattccgccatttcgtcacccatttttgcagaaccacgccgcca
atgccttttctcttaacccatttctatacccctatttccaggccatcctctctcttccat
atacccaacccctcctgccctgttctcccgaaagccctgataaagccccacgcttctggg
aaaaaaactacattctttttgtctcgggatgagcgattggaggattcgcatgccgggatt
gagcgtgaacaaattgagaattcaagcacaattgcagccatcgtgacatccatggggggt
cctcctgctgcggtgggcattgtgcgtttatcaggtcctcgtgctgtgaagatcgttggg
agtttattttgccctgccgcgaaaaagaaggggaagaatgtgagccagcagcatccatgg
agacccaccagtcatgtcgtggagtacggtgtggtattggaccaacagggcgatgtaatt
gacgaagttttgacggtgccaatgttagccccaagatcttatactcgtgaagatgtgatc
gagattcagtgtcacggaagtgaagtatgtcttcgtcgtgtgctaaaagcttgtttagaa
gctggagcccggcttgcagaaccaggtgaatttacccttcgtgcattcttaaatggacgc
ttagacctttcacaagcagaaaatgttgggaaattaatttcagccaagtctacggctgct
gctgatgcagcgttggctggaattcagggtggcttctcttccctagtcaaattgctaaga
acacaatgcatcgaattactcactgaaatcgaggcccgactagacttcgatgatgagatg
ccaccgttgaatttggaaactataatggaaaaagtgcatgccatggcacaggaagtagag
actgctcttgagacagccaattatgacaagcttcttcaatctggaatacagatagcaatt
gttggccgtcctaatgttgggaagtcgagccttcttaatgcatggagcaaaagcgagagg
gcaatagttacagaaattgctggaactaccagagatgtaattgaagcgaatgttaccgtt
tctggtattcctgtgactcttcttgatactgctggaattagggaaacagatgacattgtg
gaaaagataggtgtcgagagatctgaagctgccgcgcttggagctgatgtcattattatg
actataagtgccctcgatggatggactgcagaagataccgtacttctggatagcatactt
gcaaaaaagaaatcagatggatcatccacgcctatacttcttgtcataaacaagatagac
tgtgctccatctgctgcaaacatggatgcaattagtataaaccgtgactctttcagtaaa
caagtttttacatgcgctgtcactggacaaggaatagagcatctggagatggcaatatca
gagctgatgggactcaacaatactcttgcaagtggacgtagatggacggtaaaccagaga
caatgcgagcagcttcttagaaccaaggaggcacttggaagattgaaatcttccattgaa
gaggagctgcctcttgacttttggacagtggatttgagaggtgctgtattagctcttggg
gaaattagtggtgaggatatctctgaagaggttttgtccaatatttttggcaagttctgt
attggtaagtag
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