Cucurbita pepo subsp. pepo (vegetable marrow): 111808306
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Entry
111808306 CDS
T05351
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00061
Fatty acid biosynthesis
cpep00071
Fatty acid degradation
cpep01100
Metabolic pathways
cpep01212
Fatty acid metabolism
cpep04146
Peroxisome
Module
cpep_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
111808306
00071 Fatty acid degradation
111808306
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111808306
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cpep01004
]
111808306
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111808306
Enzymes [BR:
cpep01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
111808306
Lipid biosynthesis proteins [BR:
cpep01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
111808306
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of breast milk
111808306
Exosomal proteins of breast cancer cells
111808306
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
111808306
NCBI-ProteinID:
XP_023549978
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Position
LG13:795887..804269
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AA seq
664 aa
AA seq
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MQRKYLVQVEEGKEAAAGRPSVGPVYRSVFAKDGFPPSVQGLETCWDIFRMSVEKNPGNR
MLGRRKIIEGNLAKAGEYEWLTYQQVYELVLKIGNAMRSLGYGPGEKCGIYGANCPEWII
SMEACNAHGLYCVPLYDTLGAGAIEFIICHAETSIAFVEEKKIPELLKTLPNTANVLKTL
VSFGKVSNNHKEEVNKFGLEIYSWEEFLQKGDSQQYDLPVKGKGDICTIMYTSGTTGDPK
GVLLSNKAIIALIAGVKHLLATVKEEVQENDVYISYLPLAHIFDRVIEEVFILNGASIGF
WRGDVKLLVEDIGELKPTIFCAVPRVLERIYGGLNQKISSGGLLKRSLFNFAYSYKYNQM
QKGKKHEQAATLFDKLVFDKVKKGLGGKVRIILSGAAPLAAHIETFFRVVSCAHVLQGYG
LTETCGGTFVTLPNELRMLGTVGPPVPNVDICLESVPEMGYDSLASTPRGEVCIKGDTLF
AGYYKREDLTTEVLVDGWFHTGDVGEWQPDGSLKIIDRKKNIFKLSQGEYVAVENLELIY
GLVSDIEMIWIYGNSFEAFLVAVVNPQRQALEHWAEENGIKGDFNALCEDKRAKDYILGQ
LSKIAKEKKLKGYEVIKAVHLDPLPFDIERDLLTPSFKKKRPQMLKYYQKEIDDMYKGGN
KPVA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggaagtatctagttcaggtggaggagggtaaggaagccgccgccggacggccg
tcggtcgggccggtttaccggagtgtttttgctaaagatgggtttcctccgtcggttcaa
ggcttggaaacctgctgggatatatttagaatgtctgtggagaaaaatcccggaaatcgg
atgctcgggcgtcggaaaataatcgaaggaaatctagctaaagctggtgagtatgagtgg
ctaacttaccaacaagtctatgaattggtgttgaaaattggaaacgcaatgcgcagcctg
ggttatggaccaggtgaaaaatgtggaatttacggtgccaattgtcctgagtggatcatt
agcatggaggcttgcaatgctcatgggctatattgtgttcctttatatgatactttaggt
gctggtgccatagaattcataatatgccatgcagagacttccattgcttttgtagaagag
aagaagatcccagagctgttgaaaacacttcccaacacagcaaatgttcttaaaacactt
gtgagctttgggaaagtttcaaataatcacaaggaagaagttaacaaatttggtttggaa
atatattcttgggaagagtttctgcaaaagggagatagccaacaatatgatcttccagtg
aaagggaaaggtgatatttgcactatcatgtataccagtggaacaactggtgatcccaag
ggagtgcttttatccaataaagccattatagctcttatagctggtgtcaaacatttgctt
gcaactgttaaggaagaggttcaagaaaacgacgtttacatatcatatcttccactcgcg
catatcttcgaccgggtgatcgaggaggtgttcattttgaatggtgcctccattggattc
tggcgtggggatgtcaaattgttagttgaagacattggagagttgaaaccaactattttc
tgtgcagttcctcgtgttcttgaaagaatttatggtggtttgaaccagaagatatcgtcg
ggtggcctcttgaaaagatcgttgtttaactttgcatactcctacaaatataaccaaatg
cagaaggggaaaaaacatgaacaggcagccacactctttgataaactggtctttgacaag
gtgaagaagggattaggaggaaaagttcgaatcattttatctggagcagccccgctcgca
gctcatatcgaaacgttctttcgagttgtatcgtgtgctcatgttctacaaggatatggt
ttgacagaaacttgtggtggaacttttgttacactaccaaatgaattgcgaatgttggga
acagtaggtcctccagtgcctaatgttgatatctgtctcgaatcagtacccgaaatgggg
tacgattcgctcgctagcacgcctcgaggtgaagtatgtatcaagggagatacattgttt
gcaggatactataaacgtgaagatcttaccacagaagtcttggttgatggatggtttcat
acaggggatgttggcgaatggcaaccagatggaagcttgaaaatcattgaccgtaagaag
aacatcttcaaactttcccaaggtgaatatgttgcagtcgaaaatctagagctgatctat
ggccttgtttccgacatcgaaatgatatggatatatggaaatagctttgaggccttcctt
gttgctgttgttaacccacaaaggcaagcacttgaacattgggcagaagaaaatggcata
aaaggggatttcaatgctctttgtgaagacaaaagggccaaagactatatacttggacaa
ctctcaaagattgccaaagaaaaaaagctaaaaggttacgaagttatcaaagcggttcat
ctcgatccccttccgttcgatatagagcgtgaccttcttactccatcgtttaagaagaag
agaccacaaatgctcaaatactatcagaaagaaatcgatgatatgtataagggcggaaac
aagccagttgcctaa
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