Cucurbita pepo subsp. pepo (vegetable marrow): 111808371
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Entry
111808371 CDS
T05351
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111808371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111808371
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111808371
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_8
STAS_2
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
111808371
NCBI-ProteinID:
XP_023550072
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Position
LG13:6199722..6205058
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AA seq
377 aa
AA seq
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MVGKENLRTEDLNLCFEKLMMLAGGDGIDVGAKGVKMDGGVIAGWKDIPMELLLQIISLV
DDRTVIVASGVCCGWRDAICFGLTHLSLSWCKKNMNNLVLSLAPKFAKLQTLILRQDKPQ
LADDAVETIASYCHDLQVLDLRKSSKLSDLSLYALAHGCPDLIKLNLSGCTAFSDTALAY
LASYCRKLKVLNLCSCVKAASDTALQAIGQYCNSLQSVNLGWCENVSDVGVMSLAYGCRD
LRTLDLCGCVLITDDSVIAMANMCPHLRSLGLYYCQNITDRAMYSLAHSCIKHKPTKWGT
TGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSGCLNLMSVHCA
CAVQAHRAPSAFPYPAH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggttggtaaagaaaacttgaggactgaggacttgaacttgtgctttgaaaaactaatg
atgcttgctggtggtgatggaatcgacgttggtgctaaaggggttaaaatggacggtggg
gtgattgccggatggaaggacattcctatggagcttctcttgcaaattatatcgcttgtt
gatgatcgaactgttattgtagcttctggcgtgtgttgtggatggagggatgctatttgc
tttggcctcacccatctttctctatcatggtgcaaaaagaacatgaacaacttggtccta
tcccttgctcctaaatttgcaaagctgcaaactctaatcttgcgccaggacaaaccccag
ctcgccgacgatgctgttgagaccattgctagttactgtcatgatctgcaggtcctggac
ctgagaaaaagttccaagctcagcgatctttccctatatgccctggctcatggttgccct
gatcttataaaacttaatcttagtggttgtactgcattcagtgacactgcattggcttat
ctagccagttattgcagaaagctaaaagttcttaatctttgtagctgtgtcaaggctgca
tctgacactgcattgcaggctattggacaatactgtaatagtttgcagtccgtaaatctt
ggatggtgtgaaaatgtgagcgatgtgggtgtgatgagcttggcgtatggatgtcgtgat
cttagaaccctggacttgtgtggctgtgttctaattacagatgatagtgtgattgctatg
gcaaatatgtgccctcatctgaggtcacttgggctctactattgtcagaacataacagac
agagcaatgtactctttggcacatagctgtataaagcacaagccaacaaaatggggaaca
acggggaagggaaagaatgatgatgatggacttagaacgcttaacatcagccaatgcaca
gctcttactccccctgctgttcaggctgtttgtgactcatttcctgccctccacacctgc
tccggccgccattccctcatcatgagtggctgtctaaatttgatgtctgtgcattgtgct
tgtgcagtccaagctcaccgtgccccctctgcttttccctatccagctcattga
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