Cucurbita pepo subsp. pepo (vegetable marrow): 111808463
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Entry
111808463 CDS
T05351
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpep03009
]
111808463
Ribosome biogenesis [BR:
cpep03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111808463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
111808463
NCBI-ProteinID:
XP_023550216
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Position
LG13:7036670..7042424
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AA seq
537 aa
AA seq
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MEEELGNPVAERILPPTEQEVLNEEDVKIKKYLRGEGANLEVLKDKKLKGQLSVIEDLYG
KSAKAAAKVEKWLMPSEGGYLEAEGLEKTWRIRQETISQEVDILSRRNQHDIILPALGPY
SLDYTLNGRYMAIAGRKGHLALVDMKDLNLIKEFQVKETVRDVVFLHNELFFAAAQKKYP
YIYNRDGTELHCLKEHGSVLRLQFLKNHFLLASINKFGQLHYQDVTTGSMAGVFRTGLGR
TDVMQVNPFNGVIATGHSGGSVVMWKPTSSSPLVKMLCHQGPVSALAFHPNGHLMATSGC
ERKIKLWDLRKFEVLQTLPGHAKTLDFSQKGLLACGTGSYVQILGDLAGSQNYTRYMSHS
MVKGYQIGKILFRPYEDVLGIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEVR
SLLDKLPPETISLNPSKIGTVMTVKKKEKKTKKEREAEEESAIDAAKSITMKKKTKGRNK
PTKREKKKREIIDKSKKPFLQEQIKEEEELSRKRPRSGDDVELPKSLQRFARKKTAT
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaactaggaaatccggttgctgaaaggattcttcctccgaccgaacaggag
gtattaaatgaggaagacgtgaagattaaaaagtatctacgaggagaaggtgctaatcta
gaggttctgaaagataaaaagttgaagggtcaactttctgtcatagaagatttatatggg
aaatctgctaaagctgctgccaaggtcgagaagtggcttatgccaagtgaaggaggctac
ttggaggctgaaggattggagaagacatggagaattagacaagaaacaatttctcaagaa
gtagatatcttaagtagaagaaatcaacatgatattattttaccagctcttggaccatat
tctctcgactatactttaaacggtagatacatggccattgccggacgtaagggtcacctg
gcccttgtagatatgaaggacctcaatttaattaaagagtttcaggttaaggaaactgtt
cgtgatgtggtcttcttgcacaatgagctgttctttgctgctgcgcaaaaaaagtatccg
tacatttataatcgggatggcacagagcttcattgccttaaggagcatggatcagtcttg
aggcttcaatttctgaaaaatcacttccttttggcatccataaacaagtttggacagctt
cactatcaagatgtaacaacaggtagcatggccggtgtcttccgtaccgggttaggccgt
accgatgtaatgcaggtaaacccgttcaatggggttatagcaactggtcattcaggtggt
tcagttgtgatgtggaagcctacaagctcttctcctcttgtaaagatgctttgtcatcaa
gggcctgtgtcagcactcgcattccacccgaatggccatctcatggctacatctggttgc
gagcggaaaattaagctctgggacttgaggaagtttgaggtgcttcagaccctgcctggg
catgctaagacattagacttcagccagaaagggctacttgcttgtggcacagggtcgtat
gtacagattctgggtgatttagctggatctcagaactacacaaggtatatgtcccactca
atggtgaagggctaccaaataggaaagatactgtttagaccttatgaagatgttttaggc
ataggtcactcaatgggttggtctagcatcctcattccaggatccggtgaacccaacttc
gatacttgggtagcaaaccccttcgagacatcgaaacagcgtagagaaaaggaggttcga
tctcttctcgataagcttcctcccgagacaatttctctcaacccctcgaaaattggtacg
gttatgaccgtaaagaagaaagaaaagaagacaaagaaggaaagagaagctgaagaggag
tctgcaattgatgctgcaaagagcatcaccatgaagaagaaaacaaagggaaggaataag
ccaaccaagagagaaaagaagaaacgcgaaattatcgacaagtccaaaaagcctttcctt
caagaacagatcaaggaagaagaagagttgtctcgaaagagaccgaggtcgggcgacgat
gtcgaacttcccaagtccttacagagattcgctcgtaagaaaactgcaacttga
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