Cucurbita pepo subsp. pepo (vegetable marrow): 111808501
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Entry
111808501 CDS
T05351
Name
(RefSeq) AP3-complex subunit beta-A-like isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111808501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111808501
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Others
AP-3 complex
111808501
Endosome - Golgi transport
111808501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
AP3B1_C_2
AP3B1_C
HEAT_2
Alpha_adaptinC2
Motif
Other DBs
NCBI-GeneID:
111808501
NCBI-ProteinID:
XP_023550286
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All DBs
Position
LG01:complement(6423567..6430872)
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AA seq
1132 aa
AA seq
DB search
MFTQFGSTSDTLSKASTMVSRIGTDAHLYDDPVDVNIGPLLDSRFDSEKCEALKRLLALI
AQGCDVSNFFPQVVKNVASQTLEVKKLVYLYLLHYAEKRPNEALLSINCFQKDLVDTNPL
VRAWAMRTMAGIRLHDIAPLALVAARKCARDPSVYVRKCAANALPKLHDLRLEENATAIK
EIILILLGDSSPGVIGAAAAAFASICPNDLTLIGRNYRRLCEVLPDVEEWGQIILIGVIL
RYVVASIGLVRESIMHSLQSVGNSGSEKNGFANNFTSANEESEMNGFNDTALTNMISRCY
TEGPDEYLSRLSYSNEVFPKLDDGHFVSSKENDDIRILLECTSPLLWSNNSAVVLAAASV
HWIMAPRENIKRIVKPLVFLLRSCDATKYVVLCNIQVFAKAMPSLFAPHYEDFFICSSDS
YQVKALKLEILSSIATGSFILPILDEFQDYIRNPNRRFAADTVAAIGLCAGRLPKIAKMC
LDRLLSLIKQETSTCDNGAMDGEAAVLIQAIASIKLIVKEDPASHEKVIIQLIRGLDSVK
IPSARAMIIWMVGEYSTLGDIIPRMLVIVAKYLARSFISEALETKLQILNTMVKVLLRAK
EEDMRTCKVILGYMLEVGQCDLNYDIRDRASFIQKLLSSHLDMEVPEESRSKPRDRSWEL
ADRIFGGQLKAKQPEPINYRFYLPGSLSQIVFHAAPGYEPLPKPCTLDEAASTSRDGALE
SDSYETDNTESSSGSLDEDSASGYNSQHSFSGSSGRDESNGANHPQENDGADPLIELSDH
ANSHNIQNGASPSGSSELDELMSKNALESWLNEQPNLATVSTSEKAEVRSSSARISIGDL
GKHVTRKSYQLLDSAKGDGLKVEYSFSSQTSNISPLHVCIEASFKNCSTESMTEIMLTHE
ESDEVVDSKDKVRVGSESSSTSINTVTTPVSMEKITSLGPDQTIKRILEAQFNHHLLPMK
LNLYCNGKKHPVKLHPDIGYFVRPLTMDNEAFTAKESQLPGMFEYMRRCIFTDHLGKLND
EKSERPIEEDKFLRICKSLALKMLSNANVFLVSMELPVANFLDDATGLCLRFSAEILSNS
FPCLVSLTVEGKCLEPLHVTVKVNCEETVFGLNLLNRIVKFLGNPSVPNNNQ
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgttcactcaatttggatcaacctccgacacgctgagcaaggcttccaccatggtgtct
cggatcggcacagacgcccacctctacgacgatcctgtggacgtgaacattggtcccttg
ctcgacagcaggtttgactccgaaaaatgcgaggcactcaagcgcttacttgctctcatt
gctcagggttgtgacgtttccaacttcttccctcaggttgttaagaatgttgcatcgcag
acgttggaggtgaagaagcttgtatacttgtacctgttgcattatgctgaaaagcgtcca
aatgaagcattgctgtctatcaattgtttccagaaggatttggtggatacgaatcctctt
gtgagggcgtgggcaatgcggaccatggcaggaattcgtctgcatgacattgcacctctc
gctcttgtggcagcgaggaaatgtgccagggacccgtcagtgtatgtcagaaaatgtgca
gccaatgctcttccaaagcttcatgatttgcgactggaagaaaatgccacggctattaaa
gagattattctgatactgttgggcgattcctcccctggtgtcattggtgctgccgctgct
gcatttgcttctatctgtccaaatgatctgactttgattggaagaaattatcgaaggtta
tgtgaggtcttacctgatgttgaggaatggggtcaaataatcttaatcggagttatttta
cgctatgtcgtagcaagtattgggcttgttagggaatctattatgcattctctgcaatct
gtagggaattctggttcagaaaagaatggctttgcaaacaatttcacatcagccaatgaa
gaaagtgagatgaatggatttaatgatacggcattaacaaatatgatatctagatgttat
actgaaggaccagatgaatatctatcacgactaagttattcgaatgaagttttcccaaaa
ttggatgatggacattttgtgtctagtaaagagaatgatgatatcaggatcttattggag
tgtacgtcacctttgttatggagcaacaacagtgcagtggttcttgctgctgccagcgta
cactggattatggctccaagggagaacataaaaagaattgttaaaccattagtgtttcta
ctcagatcatgtgatgctacaaaatatgtggttctctgtaatattcaagtgtttgctaag
gcaatgccttctctctttgctccacactatgaagacttcttcatctgctcttcggattcg
tatcaagttaaagcattgaagcttgagatactatcatccattgctactggttcatttatt
ttaccaatccttgatgagtttcaggattacattagaaacccaaacagaaggtttgcagct
gatacggttgctgcaattggcttatgtgcagggcggctcccaaaaatagccaaaatgtgt
ttggataggctattgtctttaattaaacaggaaacttccacttgtgacaatggggccatg
gatggagaggcagctgtactgattcaggcaattgcatccatcaagttaattgtaaaggaa
gatccagccagccatgagaaggtaattattcagttgattcgtggcttggattcggtcaag
attccttcagcccgtgccatgattatttggatggtaggggagtatagcactttgggggat
attattccaaggatgttggttatcgtggctaagtatcttgcaagatcgtttatttcagaa
gcactggaaacgaagcttcagatactgaatacaatggttaaggtcttattgcgagcaaaa
gaggaagatatgcgaacatgtaaagtaattttaggctatatgctcgaagtgggacaatgt
gatttaaattatgacattcgtgatcgtgcttcctttattcagaagctcctgtcatcccat
ttggatatggaagttcctgaagagagtcgatccaaacccagagatcggtcatgggaactt
gcagatcgcatttttggaggacaactaaaagcaaaacaacccgaacctatcaattatcgg
ttttatcttccgggatctctttcacaaatagtttttcatgcagcgccaggttatgaacct
cttccaaaaccatgcaccttggatgaagctgcaagtacgtcaagagatggagcacttgag
agtgattcatatgagacagataatacagagtcatcatcaggatccttggatgaggatagt
gcttcaggttataattctcagcattctttcagtggttctagtggcagggatgaaagtaat
ggggcaaatcatccgcaggaaaatgatggtgctgatcctttgatcgaactttctgatcat
gccaattctcacaacattcagaatggagcctctccctctggttcttcagagttggatgaa
ttgatgtcaaagaacgccctagaatcatggctgaatgaacagccaaatttagcaactgta
agtacctcagagaaggctgaagttcgaagttcctctgctagaatatctataggtgatctt
gggaaacatgtgacacgcaaaagctatcaactcctagattctgctaaaggagatggcttg
aaggtggaatactcattttcatcccagacttcaaatatatctcctcttcatgtttgtatt
gaagcatccttcaaaaactgttctactgagtctatgactgaaattatgttgacccacgag
gaatctgatgaagttgtagattcaaaagacaaagttcgggtcggaagtgaaagctcctct
acatctattaacactgtgacgaccccagtttccatggaaaaaattacatctttgggacct
gatcagactatcaagagaattcttgaggctcaattcaatcaccacctcttgcctatgaag
ttaaatttgtactgtaatggcaagaagcatcctgttaagctgcaccctgacattggatat
tttgtgagaccacttacgatggacaatgaagccttcacagctaaggagtctcagctacca
ggaatgtttgagtacatgaggagatgcatattcactgaccaccttgggaagcttaacgat
gaaaagagcgagagaccaatagaagaagataaatttcttcgcatatgcaagagcttggca
ttgaagatgctcagcaatgcaaacgttttcctagtatccatggaactcccagttgctaac
tttctcgacgacgcaaccggtttgtgcctacggttcagcgccgagattctgagcaactca
ttcccgtgcttggtttcgctgactgttgaaggaaaatgcttagaacccctacatgtaact
gtgaaagtaaactgtgaagaaactgtatttgggttgaatttgttgaacaggatagtgaaa
ttcttaggcaacccctctgtccccaacaacaaccagtaa
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