Cucurbita pepo subsp. pepo (vegetable marrow): 111808630
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Entry
111808630 CDS
T05351
Name
(RefSeq) glutamine--tRNA ligase isoform X1
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00970
Aminoacyl-tRNA biosynthesis
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111808630
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cpep01007
]
111808630
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpep03016
]
111808630
Enzymes [BR:
cpep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
111808630
Amino acid related enzymes [BR:
cpep01007
]
Aminoacyl-tRNA synthetase
Class I (A)
111808630
Transfer RNA biogenesis [BR:
cpep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111808630
Prokaryotic type
Other AARSs
111808630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C
tRNA-synt_1c_C2
tRNA_synt_1c_R2
GatB_Yqey
Stm1_N
Motif
Other DBs
NCBI-GeneID:
111808630
NCBI-ProteinID:
XP_023550510
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Position
LG13:4400287..4413122
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AA seq
830 aa
AA seq
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MTVKNENLDKDKLLEQFLRIGLDERTARNTVANNKVTANLNAVIHEAGVLEGCDKAVGNL
LYTVATKYPTNALVHRPILLKYVTSNKIKMPAQLEAAFSFFSAAGQEDIKLNEFEDKCGV
GVEVSVEEIEKTVNEVFEEHKNEILEQRYRTNVGDLFGQVRKKHPWADPKIVKQYIDSKL
FELLGERTAADNEKIVKKKKEKPAKVDDKPVAIVSVEQPPSEEDLNPYLIFPRPEDNYKV
HTEVFFSNGTILRCCNTKELLEKHLKATGGRVLTRFPPEPNGYLHIGHAKVVSAVLLYAF
CLFFNCCLQSLTRNFPLFVIIIMIYQAMFVDFGLAKERGGGCYLRYDDTNPEAEKKEYID
HIEEIVKWMGWEPFKITYTSDYFQDLYELAVELIRRGHAYVDHQTPDEIKEYREKKMNSP
WRDRPVAESLKLFDEMKQGLIEEGKATLRMKQDMQSDNFNMYDLIAYRIKFTPHPHAGDK
WCIYPSYDYAHCTVDSLENITHSLCTLEFETRRASYYWLLHALDLYQPYVWEYSRLNVSN
NVLSKRKLNRLVTEKWVDGWDDPRLLTLAGLRRRGVTSTAINAFVRGMGITRSDCSLIQF
NRLEYHIREELNKTAARAMVVLQPLKVVITNLENGSILDLDAKKWPEAQADEASAFYKVP
FSNIVYIEQSDFRLKDSKDYYGLAPGKSVLLRYAYPIKCTDVILADDKETVLEIRAEYDA
SKKSKPKGVLHWVAQPSPGVNPLNVEVRLFDKLFLSENPAELDNWLADLNPHSKVVIPSA
YAVPELRNAVVGDTFQFERLGYFAVDKDSTPEKLVFNRTVTLRDSYKSSK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgaaaaacgagaatctcgacaaggacaagttgctggagcagtttctgagaatc
ggattggatgagcgtactgcacgaaacaccgttgccaacaataaggtcactgccaatctc
aatgccgttattcatgaggctggcgtgcttgaaggatgcgataaggctgttggaaatcta
ttgtatactgttgcgacaaagtatcctacaaatgcacttgttcatcgaccaatattgctg
aaatatgttacctcaaataagataaagatgccggctcaattggaagcggcattttcattt
ttttctgctgcaggccaagaagatattaaattaaatgaatttgaagataaatgtggtgtt
ggtgtagaagtttcagttgaagaaattgagaagactgtgaatgaggtctttgaagaacat
aaaaatgaaattctggagcaacgttatcgaacgaatgtgggtgacttgtttgggcaggta
cggaagaagcatccttgggctgatccaaagattgtaaagcaatatattgattccaaatta
tttgaattactcggtgaaaggactgcagcagataatgaaaagatagtgaaaaagaaaaaa
gagaagcctgctaaagtagacgataaacctgttgctattgtttctgtggaacagcctcca
tctgaggaagatcttaacccatatttaatattcccccggccagaggataattataaggtt
catactgaagtatttttcagtaatggaactatcctaagatgttgcaacaccaaggagctg
cttgaaaagcacctaaaagcaacagggggaagagttttgactcgctttcctcctgaacca
aatggttatcttcatattggtcatgccaaggtagtatcagctgttcttttatatgctttt
tgtctttttttcaattgctgtcttcagtctttgaccagaaactttcctctatttgtcatt
atcattatgatctatcaggcaatgtttgttgattttggcctggcaaaagagcgaggtgga
ggttgttatttgaggtatgacgacacgaatccagaagctgagaagaaggaatatattgat
catatagaagagattgtcaagtggatgggttgggagcctttcaagattacttatactagt
gattacttccaagatctgtatgagttagctgtggagctcatacgtaggggtcatgcttat
gtggatcaccagactcctgacgaaataaaggagtacagagagaaaaagatgaatagtccc
tggagggataggcctgtggctgagtcattgaaattgtttgacgaaatgaagcaaggtctg
attgaggaaggcaaggcgactcttagaatgaaacaagacatgcagagtgataattttaat
atgtatgatcttattgcatatcgtattaagtttactcctcatccacatgctggagacaag
tggtgtatttatccaagctacgattatgcacactgcactgtggattctcttgagaatata
acacattcgctgtgtaccttggaatttgaaacacgtcgtgcttcgtactactggttattg
catgcactggacctttatcaaccgtatgtgtgggaatattctcgcctcaatgtttcaaat
aatgtgttgtctaagcgtaagttaaatcgactggtgacggaaaagtgggttgatggttgg
gatgatcctcgcctattgacacttgctggtcttaggcgcagaggtgttacatcaactgca
attaatgcgtttgttcgaggaatgggaattacaagaagtgactgttctttgattcagttc
aatcgtcttgaatatcacattagagaagagctaaataaaactgctgcacgagcaatggtt
gtcttgcagccacttaaggttgttattacaaacttagaaaatggatcaattttggatctt
gatgccaagaaatggcctgaagctcaagcagatgaggcatcggccttttataaggttccc
ttttccaatattgtgtacatagaacaatcagatttccggttgaaagattcaaaagattac
tatggtcttgcacctggaaagtctgtccttctgaggtatgcatatcctattaaatgtaca
gatgttatccttgcggatgataaggaaactgtacttgagattcgagcagaatatgatgct
tccaagaaatcaaagccaaagggggtcctacattgggttgcacaaccttctccaggagtt
aatccgctcaatgtggaagttagattgtttgacaagctattcctttctgagaaccctgct
gaacttgataattggcttgctgatttgaacccacattctaaagtagtcatcccaagtgca
tatgctgtaccagaacttaggaatgctgttgttggggatacattccaatttgaaaggctt
gggtattttgcggttgataaagactcaactcctgagaaactcgtattcaatcgcacagtc
acgctgagagatagctataagagcagcaagtga
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