Cucurbita pepo subsp. pepo (vegetable marrow): 111808790
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Entry
111808790 CDS
T05351
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111808790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111808790
Spliceosome [BR:
cpep03041
]
Common components
Common spliceosomal components
SR proteins
111808790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
111808790
NCBI-ProteinID:
XP_023550734
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All DBs
Position
LG13:3044258..3051794
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AA seq
287 aa
AA seq
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MSSRFSRTIYVGNLPSDIKEYEIEDLFHKYGRILDIELKIPPRPPCYCFVEFENVRDAED
AIRARDGYNFDGCRLRVELAHGGRGPSSSDRRSSYGGGGGSGGGGGGGGGGGRFGVSKRS
EYRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGVVDYTNYDDMKYAIRKLD
DTEFRNPWARGYIRVKKYDGSPNRSRSRSRSRSRSRSRSRSRSRGRDRDRDRDRSRSRSR
SRNRSQSRNQSRSRSRSRSARPNRSKSAERSVSRSVSRSRSPSPVKS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcgtttttctcgcacaatatatgttggaaacttgccctcagacataaaagag
tatgaaattgaagatttgttccacaagtatggacgaattttggatattgaattgaagatt
ccgccacgccctccgtgttattgttttgtggagtttgagaatgttagggatgcagaagat
gcaatccgagctcgtgatggatataattttgatggttgccgtctaagggttgagcttgca
catggtggtagaggcccttcatccagtgatcgtcgtagcagttatggtggtggtggtggc
agtggtggtggaggaggaggaggagggggagggggacgttttggtgtttcaaaacgatca
gaatatcgggttattgtacgtggactcccatcttctgcttcttggcaggatttgaaggat
catatgcgcaaggctggtgatgtgtgttttgctgaagtttctcgtgacagtgaagggaca
tttggggttgttgattatactaactatgacgacatgaaatatgctattcgaaaacttgat
gatactgaattcagaaatccttgggctagaggatacattcgggtgaagaagtatgatgga
agtcccaacaggagcaggagcaggagcaggagcaggagcaggagcagaagcagaagccgc
agtagaagtcggggtcgggatcgggatcgggatcgggatcgtagccgaagtcgaagtcgg
agccgaaaccgaagtcaaagccgaaaccaaagccgaagccgaagccgaagccgaagtgct
agaccaaataggagcaaatcagcagaaagatctgtttctagatcagtttcaagatcaaga
tctccatcccctgttaaatcttag
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