KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111808801
Entry
111808801         CDS       T05351                                 
Name
(RefSeq) ras-related protein RABF1-like
  KO
K07887  Ras-related protein Rab-5A
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04144  Endocytosis
cpep04145  Phagocytosis
cpep04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111808801
   04145 Phagocytosis
    111808801
   04148 Efferocytosis
    111808801
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpep04131]
    111808801
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpep04147]
    111808801
   04031 GTP-binding proteins [BR:cpep04031]
    111808801
Membrane trafficking [BR:cpep04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    111808801
 Endosome - Lysosome transport
    111808801
Exosome [BR:cpep04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111808801
  Exosomal proteins of other body fluids (saliva and urine)
   111808801
  Exosomal proteins of colorectal cancer cells
   111808801
  Exosomal proteins of bladder cancer cells
   111808801
GTP-binding proteins [BR:cpep04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    111808801
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA MMR_HSR1 GTP_EFTU DUF6806 AAA_7 AAA_16 TniB
Other DBs
NCBI-GeneID: 111808801
NCBI-ProteinID: XP_023550755
LinkDB
Position
LG13
AA seq 215 aa
MGTSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF
AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD
NINELFEEILSDCYDQLPHDLATTLMLLSAASSPR
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcacctcctcctctgtccctggcagggcttctggaggatcggggcggcttaatcca
aagaacagggcagctgattccaagaatttgcgcgtcaagcttgtcctgttaggtgattct
ggtgttggtaaaagctgtattgttcttcgctttgtccgtggtcagtttgatccgacgtct
aaggtaactgttggagcatcgttcttgtcacaaacgatagttttacaagattccacgaca
gtgaaatttgaaatatgggataccgctgggcaagagaggtatgctgcattagctccactt
tactatcgaggtgctgcagttgcagttgttgtatatgatataacaaactcagattcattc
gccaaagcaaaatattgggttaaggagctacagaagcatggccgctctgatatcattttg
gcattggtcggtaacaaagctgatcttcaagaggaaaggaaagtatctgttcaggatggg
actgagtatgcagagaagaatggattgttctttattgagacatctgcaaagactgcagat
aatataaacgagctttttgaggagattctaagcgattgctacgaccaacttcctcatgat
cttgctacgacattaatgcttttgtcagcagcttcatctcccaggtga

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