Cucurbita pepo subsp. pepo (vegetable marrow): 111808932
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Entry
111808932 CDS
T05351
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111808932
Spliceosome [BR:
cpep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111808932
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GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
111808932
NCBI-ProteinID:
XP_023550948
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All DBs
Position
LG13:2583360..2589027
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AA seq
448 aa
AA seq
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MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG
KKIEPESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTA
VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVGQ
QPGQMMGPSTHQYNGNQYGPSAEQPGVQPQPSSGWGSGGPAAPYSMPMHNPAYMSSGTMP
PQMAPGMMPSPSGLHQTPPPPYRPDHRQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtttctagtcagccacagttccgttatacccagccaccgtcaaaggttctc
cacttgaggaatttaccttgggaatgcactgaggaggaactgattgaactggggaagcca
tttggaaaagttgtgaacacaaagtgtaatgttggagcaaacagaaatcaagcttttatt
gagtttgcagacataaatcaagctattgcaatgatatcatattatgcatcatcctcggag
cctgctcaagttagaggaaaaactgtttatctgcagtattccaaccggcaagaaattgtg
aacaacaaaactactgctgatgttcctggaaatgtgcttttagtaacaattgaaggcact
gatgcacgccttgtcagcattgatgttttgcacttggtcttttcagcctttgggttcgtg
cataaaattactacctttgagaaaacagctggatttcaggcattggtgcaattttcagat
gcagagactgcctcgtctgctaaaaatgccttagatgggagaagcatccctaggtatctg
cttcctgatcatgttggaccatgttcccttagaattacttactctgcccacactgatttg
actgtgaaatttcagagccatcgaagcagggactacactaatccttatctgcctgttgct
ccatcggccatagatggaagtggtcagtcacctttgcagttcaccgtgggtttggatgga
aagaagattgaaccagagagtaatgttcttcttgcctccattgagaacatgcagtatgca
gtgacgttggaggttttgcacatggttttttcttcatttggacctgtccaaaagattgcc
atgtttgataagaatgggggagtgcaggccttgattcagtatccagatgttcagactgcg
gtagttgccaaggaagccctggagggacactgtatttatgatggaggattctgcaagctt
cacatctcatactcgcgccatactgatttgagtatcaaggtgaataatgatcgaagtcga
gactatacaattcccaatactccttccatggtaaattctcaaccgcctgttgtggggcag
caaccaggtcaaatgatgggtccttccacccatcaatacaacggaaaccagtatggtcct
tccgccgagcagcctggggtgcagcctcagccttcttcaggttggggatctggtggtcca
gctgcgccttactccatgcccatgcacaatcctgcttacatgtcatcagggacaatgccg
cctcagatggccccaggtatgatgccaagccccagtggtttacaccagacaccgccacca
ccatatcgccccgatcacaggcaatag
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