Cucurbita pepo subsp. pepo (vegetable marrow): 111809087
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Entry
111809087 CDS
T05351
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111809087
Spliceosome [BR:
cpep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111809087
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
HTH_47
Motif
Other DBs
NCBI-GeneID:
111809087
NCBI-ProteinID:
XP_023551202
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Position
LG13:complement(9080194..9084565)
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AA seq
752 aa
AA seq
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MLATTCFSPALPRILFPPSFRSDSTPLHLSSHKPRAPITATSTGSQSSLLSEPSSDSNAA
INLRTAPWTKTPLYLQPLEEEGVDLAKPERSNGSDGHGGKKRYRALADRRNVKTGKYAMR
RIAKSIEKLQKNGDSGETGMKLEEVEFGDFYLEGFDESRTRGRMPWEKDDGIVLRRPKKK
TVTSAELSLDKVLLERLRGEASKMEKWVKVNKIGVTQDVVNKIHFTWETNELAMLKFDVP
LSRNMDRAREIVEMKTGGMVVWSKKNALVVFRGCNYPLGLKLSTKMQVDSPYCSRTPFLE
TDTDFSLDEHDEGGSNRSINDNVDEWGEASTSFLSGSLYERETDRLLDDLGPRFIDWWMH
KPLPVDADMLPEVVPGYMPPYRRCPPFTNPKLTDAELLYLRKLAHPLPTHFVLGRNRKLQ
GLAAAILKLWEKSLIAKIALKWGVPNTNNEQMAYELKSLTGGTLLLRNKFFIILYRGKDF
LPVGVANSIIQRETELQRWQLHEENSRLKASELFCFDTGNLEERAKAGTLSDFKDITMEY
EDLTTGSTESKLQADAEKGKIIRELKKQERRLSILDFKVEKSTKELTKLNASCRHVEPDA
DQELITNEERICFRKMGLKMHSCLTLGRRGIFDGVIEGLHQHWKHREVVKVISMQRAFNQ
VLSTAKSLEAESGGILISVDKLKEGYAIIIFRGKNYKRPLRSVSKNLLTKGKALRRSLEI
QRIGSLKFFANQKWQKVSELQLELENVHDSGE
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccacgacttgcttctctccagctctgcctaggattctctttcccccatccttt
cgatcagactccactcccttacacctttcctcccacaagcctcgcgccccaattaccgcc
acttctacaggatcacaatcatctcttctgtcggagccctcttccgactccaatgccgcc
attaacctccgtacagcgccatggacgaagactcctctctatcttcaacccctagaagaa
gaaggcgtggatctcgcaaagcccgaaagaagtaatgggtcggacggtcatgggggcaaa
aaacgctatagggcgttagccgatagaagaaatgttaaaacagggaaatacgcaatgcga
cgaattgctaaaagcattgaaaaacttcagaaaaatggtgattcgggagaaactggaatg
aaattggaggaggttgaatttggggatttttatttggagggttttgatgagtcgagaact
cgcgggagaatgccgtgggagaaggacgatgggattgttttgaggaggcctaagaagaaa
acagtgacttcagctgagctgagtcttgataaagtgttgctcgaaaggctgaggggtgag
gcttcaaaaatggagaaatgggtgaaggtcaataaaattggggttactcaagacgttgtg
aataagatacacttcacatgggagacaaatgagcttgccatgctgaaatttgatgtcccc
ttgagccgcaatatggatagagcacgagaaattgttgagatgaaaactggtggtatggtc
gtctggagtaagaaaaacgcccttgttgttttcaggggttgcaattatccactgggtttg
aaacttagcacaaaaatgcaagtagatagtccttactgttccagaacaccgttcctggaa
acagacactgatttttcgctcgacgaacatgatgaaggtggttcgaatcgaagtataaac
gacaatgttgatgaatggggagaagcttctacttctttcttgagtgggtcactctacgag
agggaaactgacagactattagatgatttggggcctcgctttattgactggtggatgcac
aaacctctgccggttgatgctgacatgcttccagaggtggttcctggatatatgcctccc
tataggcgctgtccaccctttactaacccaaagcttacagatgctgaactactatatctg
aggaagcttgcacatcccttacctactcattttgttcttggcagaaacagaaaacttcaa
gggttggctgctgccatcttaaagttatgggagaaaagtctgatagctaagattgctttg
aagtggggggttccaaatacaaacaatgagcagatggcgtatgaacttaagagtctcaca
ggaggaacattgctgctgcgcaacaagtttttcattatcctttaccgaggcaaggatttc
ctacctgttggagttgccaattcaataattcaaagagaaacggagctccaaagatggcaa
cttcacgaggaaaattcacggctgaaagccagtgaacttttttgttttgacactgggaac
ttggaagagagagccaaggctggaactttatcagattttaaggatatcacaatggagtat
gaagatttgacaaccggaagtacagaatcaaaacttcaagcagatgctgaaaagggaaaa
ataattagggagctgaagaagcaagagcgaaggcttagcattcttgactttaaggtagag
aagtcaacaaaggagttgacaaagttgaatgcatcatgcagacatgtcgagccagatgca
gaccaggaactgattacaaatgaggagaggatatgttttaggaagatgggattgaagatg
catagctgcttaacactcggtaggcgtggtatctttgatggtgttattgaaggtttgcat
caacactggaaacacagagaggtggtaaaggtgattagcatgcagagagcttttaatcag
gttctttctactgcgaaatcgcttgaagcagaaagtggtgggattttaatatccgtggac
aaactaaaagaaggttatgccataattattttccgtggaaagaactataaacgacctcta
cgttcggtgtccaagaatctcttgactaaaggaaaagcattacgtagatccttggagatt
cagagaattggatcactgaaattctttgctaatcagaaatggcaaaaagtttctgaatta
caactcgaactggagaacgtgcatgatagtggggagtaa
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