Cucurbita pepo subsp. pepo (vegetable marrow): 111809200
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Entry
111809200 CDS
T05351
Name
(RefSeq) beta-adaptin-like protein B isoform X1
KO
K12392
AP-1 complex subunit beta-1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111809200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111809200
Membrane trafficking [BR:
cpep04131
]
Endosome - Golgi transport
Others
AP-1 complex
111809200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
Alpha_adaptinC2
PDS5
HEAT_EZ
Atx10homo_assoc
HEAT_GCN1
Arm_2
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
111809200
NCBI-ProteinID:
XP_023551355
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Position
LG13:1052708..1064481
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AA seq
900 aa
AA seq
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MSAHNSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCM
QTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKI
TEYLCDPLQRCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLESLKDLISDNNPMVVA
NAVAALAEIQENSSRPIFEITSHTLSKLLTALNECTEWGQVFILDALSRFKAEDCREAEN
IIERVTPRLQHANCAVVLSAVKMILQQMELISSADVVRNLCKKMAPPLVTLLSAEPEIQY
VALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEILIKLASERNIDQVLLEFKE
YATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNHVVQEAIIIIKDIFRR
YPNTYESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLENFPEEPAQV
QLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLSTDPEAAKD
VVLSEKPVIGDDSNLLDSSLLDELLANVATLSSVYHKPPEAFVTRTKIAQRTDEEDFPEG
SDTGYSESPAHAGGALPPTTSDAPNSVPKRLALGLVAPPPPVSVPDLLGDLIGLDNNAIV
PFDQPAASADPPLPILLPASAGQGLQISAQLTRLDGQVFYSLLFENNTQITLDGFMIQFN
KNTFGLAPAGPLQVPSMQPGSIVSTLLPMVVFQNMSQGPPSSLLQVAVKNNQQPVWYFND
KISMHVFFTDDGRMERANFLETWRSLPDSNEVSKDFPAIVLTNMEAVLERLAATNMFFIA
KRKHTNQDVFYFSTKIPRGIPFLIELTALIGTPGLKCAIKTPNIDMAPLLFDALETLLKE
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcacaactccaagtatttttccaccaccaaaaagggtgaaatccccgagctc
aaagaggagcttaattctcagtacaaggataaaagaaaagatgctgttaaaaaggtcatt
gctgcaatgacggttgggaaggatgtatcgtcacttttcacagacgtggtaaactgcatg
cagactgaaaatttggagcttaaaaagctggtttacttgtatctaattaattatgccaaa
agccagcctgatctagccattctagcagtgaacacatttgttaaagattcacaagatccg
aatcctttaattcgtgcgttggccgtaaggacaatgggatgcattcgtgtggataaaatt
acagaatacttgtgtgatcctcttcagagatgccttaaggatgatgacccttatgtccgc
aagacagctgccatctgtgttgccaaactttttgatataaatgctgagttagttgaggac
agaggttttttggaatctctcaaagacttaatatcagataacaatccaatggttgttgca
aatgccgtggctgctcttgctgagatacaggagaatagtagcagacccatctttgagatc
acaagtcacacactgtcaaaacttctcacagctttgaatgagtgtactgagtggggtcaa
gtttttatactggacgcactttctagattcaaagcagaggattgtcgtgaagcagaaaat
ataatagagagagttactccacggctacaacatgctaactgtgctgttgttctgtcagct
gtgaagatgattcttcaacaaatggaactgatcagtagcgctgatgtagttcgaaatctt
tgcaaaaagatggctcctcctcttgttactttgctttcggcggaacccgagatacaatat
gttgcactgcgaaatatcaaccttatagtacagaaacgtcctactattcttgcacatgaa
attaaggttttcttctgtaaatacaacgatccaatctatgtaaagatggagaagttagag
atcttgattaagcttgcatctgaacggaatatagaccaggttctgctggagttcaaggag
tatgccactgaagtagatgtagattttgtaagaaaagctgtccgtgccattggtaggtgt
gcaatcaagctagagagagctgctgaacgatgcataagtgtgttgctcgagctgatcaaa
attaaagtcaaccacgtggttcaagaggctattataattatcaaggatatttttaggaga
tatcctaacacttatgagtccatcattgcaacactctgtgaaagcttagatacgttggat
gagccagaagccaaggcatcaatgatctggattattggagagtatgcggagagaattgac
aatgcagatgaacttcttgaaagcttcttggagaatttccccgaggaacctgcacaagtc
cagcttcaattgctgactgcaactgtcaaactttttcttaagaagccaactgagggacca
cagcagatgattcaggttgttttgaacaatgctactgtggagacagacaatcctgatctg
cgggaccgtgcatatatctattggcggctcctatcaactgatccagaggcagcgaaggat
gtggttctttccgagaagcctgtgattggcgatgattcaaatctgcttgattcctcgctc
ctagatgagctccttgccaatgttgccactttatcgtctgtatatcacaagccccctgaa
gcatttgttacccgtacgaagattgctcagagaacagatgaagaagattttcctgaaggc
agtgacacagggtattcagaatctcctgcccacgctggtggtgcattgcctccaactacc
tcagatgcacctaattcagtaccaaagagactggcccttggcttagttgctcctccacct
ccagtttcagttccggatttacttggtgacctgattggattggataataatgctattgtc
ccttttgatcagcctgctgcttctgctgaccctccattgcctatcctgctaccagcatca
gctggtcaaggcttacaaattagtgcccagctcacacgattggacggtcaagtattttac
agtttattgttcgagaacaatacacagattacattggatggattcatgatccagtttaac
aagaatacctttggcctcgcccctgcaggacccttgcaggttccatcgatgcagcctggg
tcaattgttagtactctcctgcctatggtagtgttccaaaatatgtctcaaggtccccca
agttcacttttgcaggtagccgtgaagaacaatcagcagccagtgtggtacttcaatgat
aaaatctcaatgcacgttttcttcaccgatgacgggaggatggaacgtgcaaactttctt
gagacttggaggtccctcccagattcaaatgaagtttccaaggatttccctgccattgtt
ctaaccaatatggaggctgttctggaacgactggctgctacaaacatgttcttcattgct
aaaaggaaacacacaaaccaagacgttttctatttctctaccaaaattcccagaggaatc
cctttcttgatcgaattgactgcgcttatcggaaccccgggactgaaatgcgccatcaaa
accccgaacattgacatggcaccactcctttttgatgccttggagacccttctcaaggaa
tga
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