Cucurbita pepo subsp. pepo (vegetable marrow): 111809231
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Entry
111809231 CDS
T05351
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111809231
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111809231
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GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
111809231
NCBI-ProteinID:
XP_023551413
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Position
LG13:complement(8491599..8496585)
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AA seq
376 aa
AA seq
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MENELVELFEAAKKAADAAAAPSNDGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLR
HLTKHPKKKIQNYASDLIEIWKEIVIKETNKNKKNGNIDCKESPKIGSPSAESVKVEKFR
KSSSMKVERVSRVEQFNGNGVTSSAKFSRSESDISEKNSVKVEKTDSVVKVERIVKEEKR
ISIEKKPSSSGTDAPPKLTSMIKSKDAARDKIRELLFEAFSKVPSEADEDVMDEVNASDP
IRVAVSVESVMFENWGGSTGSQKTKYRSIMFNLKDPKNPDFRRKVLLGLVKPDRLINMST
ADMASDQRKRENEEIEQKALFDCERAGAPKATTDQFKCGRCGQRKTTYYQLQTRSADEPM
TTFVTCVNCNNHWKFC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgagctggtggagttatttgaagcggcgaagaaggctgcagacgccgctgca
gcaccatcgaatgatgggggagccgaagaaagtcgttgcctagatgccctacgtcagctc
aagaaatttcctgttacttatcaaatccttgtttccactcaggtcgggaagcgccttcgg
cacctcactaagcaccccaagaagaaaatacagaactatgcttctgacctgattgagata
tggaaggaaatagtaatcaaggagactaacaagaataagaaaaatgggaacatcgactgt
aaagagtcgcctaaaattggttctcccagtgcagagtccgttaaggtggagaagtttaga
aaatcatcttccatgaaggttgagagagtttcccgggtcgagcaattcaatggaaatggt
gtcacaagctctgcaaaattttccagatcggaaagcgacatctcggagaaaaactctgtt
aaggttgagaaaactgattcagtggtcaaggttgaaaggatagttaaagaggagaagaga
atctcaatagaaaagaaaccatcatcaagtggcactgatgcacctccaaagcttacttcc
atgattaaatcaaaagatgctgctagagacaaaataagagaacttctctttgaggctttc
tccaaagttcctagtgaggctgatgaagatgttatggatgaagtaaatgcaagtgatccg
attcgggttgctgtttcggtagaatccgtgatgtttgaaaattggggaggttctactggc
tcacagaagaccaagtacagatctataatgtttaacctcaaggatccgaagaacccagac
tttcgaagaaaagttcttcttggacttgtaaagccagataggctgatcaatatgagcaca
gctgatatggcaagcgaccagagaaaacgtgaaaatgaagagattgaacagaaagcctta
ttcgattgtgagcgtgcaggagctccaaaagctactaccgatcaattcaagtgtggtcga
tgcggtcagcgaaaaacaacctactaccaattgcagacgcggagtgctgatgaacctatg
accacctttgtaacttgtgtaaactgcaataaccattggaagttctgttga
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