Cucurbita pepo subsp. pepo (vegetable marrow): 111809347
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Entry
111809347 CDS
T05351
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111809347
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
111809347
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
111809347
NCBI-ProteinID:
XP_023551559
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All DBs
Position
LG13:complement(3572538..3594588)
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AA seq
1610 aa
AA seq
DB search
MDQPQRSSSVTAVSTSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKRVL
AINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFALR
SLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPNSS
TFQSSNPASPLPSVHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA
ISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKA
LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMA
MHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIASAI
QRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEATI
DRIFELLKLTNSEIHCWQEWLVFSDIFYFLMKSGCIDFADFVAKLFSRVTEGGHHVLRTN
HVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSADPNNPQSILLDFISSCQN
LRIWSLNTATREYLNNEQLQKGKQIDEWWRQASKGDRMMDYMNMDDRSIGMFWVVSYTMA
QPACETVMNWLSSAGVPELSSAQNLQTNERIMIMREVSPLPMSLLSGFSMNLCSKLTYQM
EESLFSGQAVPSIALAETYTRLLLLAPHSLFRSHFNHLAQKNPSLLSKPGVTLLVLEILN
YRLLPLYRYEGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKRE
GKGPTEFTETLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYF
PPVLREALIGRIDKRGVAIQAWQQAETTVINQCNQLLSPSADPTYVITYISHSFPQHKQY
LCAGAWILMQGHPENINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQD
ILLKVCANLSFFVWTQELLPLDILLLAFIDRDDDPNALRIVISLLDRQELQQRVKLYCIN
RVSPEHWLHSAVFKRNDLQKALGNHLSWKDRYPVFFDDIAARLLPVIPLIVYRLIENDAV
DQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKLIVRILYVLDISKIPFSESFPH
YISSPGPVMCPPMDYFATLLLGIVNNVIPSLQTSKPGTASDTSSNSMRPSHNKAPGTTPP
GATSASESQKAFYQIQDPGTYTQLVLETAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQ
SSNNFHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSASGINTPNFVSRSGYTCQQLSS
LMIQACGLLLAQLPQEFHVQLYLEASRIIKETWWLSDATRSLGELNSAVGYSLMDPTWAA
QDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKL
ANAHSLFCKTLSSLLSVLVDVFGKNTQTSIPVEAAEISDLIDFLHHVVHYEGQGGPVVAN
SKPRQEVLGIIGRALENLRPDVQHLLSHLKPDTSSSIYAATHPKLVQNPA
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaccacagcgatcgtcatcagtaacggcggtctccacttcccgcgcttaccag
tttcacccagctcgagctgccattgccaatctcttcgacctctacttgggaaggagtaat
cgtctaaagcccgaagattcagctcgagaacctccgaacaaggcccaaaagcgtgtacta
gctattaacagagagcttcctcctcggaacgagcagttccttttagattttgagcaaatt
cagaatcaatttgcagactatgatcagttgcatgctgtgactgaatcagttcttatctcc
ctagttgtacagtgcagtggtcatgtaccaagggcagaatttcttctctttgctttacgg
agtttatgcagtataggttacattaattgggacacttttttgccgtcccttctttcttca
atctcatctgcagaagtttccctgggccagggaagtcaagctgcgcctactactgtctca
actacaaatttatcgcagtctggggtgcttccatcctcaaacccagtccctaacagttct
acttttcagtcttccaatcctgcctcgccgttaccatcggttcatggaatcagttcacct
gctcaatcaagcatcgatccaacttcttgcacagcattatcaccaatcaaatcctctgat
ctttctgggactggattaccatctgcagttagggtcaattcatttttgagaaataatgca
ataagcagtctacgtcagctttgttgcaagattatcttaagtggtcttaaatttgatttg
aaaccagtgacgcgtgctgatattttttcccacatgcttaattggatggttaattgggac
caacggcaacaagggattgaggaatcagagaatatgaaatcctggaggcctgacaaggct
ctcattgaatggctacatagctgtttggatgtggtctggcttttggttgaggagaataaa
tgtcgtgtgcctttctatgaattactacgcagtggcttgcaatttatagataacattcct
gacgatgaagccttatttacactcatcttggagatccataggaggcgagatatgatggca
atgcacatgcagatgttggatcaacaccttcactgccctacatttgggactcagcggatc
ttttctcaaacaatgcagaacatatctggggaagcagtagcaagctcgcgccattcacca
atcacatatccaagtgtacttggtgaacctctgcatggagaggatattgcatcggctatt
cagagaggaactcgagactgggaaagagctatgcgttgtataaggcacgctcttcgcaca
accccatcacctgaatggtggaagcgcgtgcttcttgtggctcctggctataggtctcct
gcacaaggacttagtcctggtgctgtttttacatctgagatgatatgtgaggcaacaatt
gatagaatatttgagctattgaagctgacaaattcagagatacattgctggcaagagtgg
ctcgtcttctcagatatattctattttcttatgaaaagcggatgtattgattttgcggac
tttgtggctaagctgttttctcgtgtaacagagggaggtcaccatgtcttaaggacaaat
catgtcacttggctgtttgcacaaatcattcgtgttgagcttgtgatgagtgctttgaat
tcagatgcaaggaaggtggagacgacaagaaaaatattatcatttcatagagaagataaa
agtgctgatccaaataatcctcaaagcatcttgcttgattttattagtagttgtcagaac
ttgcgtatttggtcattgaacacagcaacaagagaatatttgaataatgagcagctacag
aaaggaaaacaaattgatgaatggtggaggcaagcaagtaaaggtgatcgtatgatggat
tatatgaacatggatgacagatcaattgggatgttttgggttgtctcatacaccatggcg
caaccagcatgtgaaactgtgatgaattggttatcttctgctggggttccagaactatca
tcagcacaaaatttacagaccaatgagaggataatgataatgcgagaagtgagcccattg
ccgatgtctttgttatcaggtttttcaatgaacttgtgctcgaagctgacctatcaaatg
gaagaatctttattttctggacaggctgttcccagtattgcattggctgaaacctatact
agattgcttctcctcgcaccacactcattgtttcgttcacattttaaccatttagcacaa
aaaaacccatccctattgagcaaaccaggagttacgcttctagtgcttgaaattctgaac
tatcggttgcttcctctctacaggtacgaaggcaaaagcaaggctttgatgtatgatgtt
acaaaaataatttctgcacttaaagggaagcgtggagaccatcgagtatttagattggct
gaaaacttgtgcatgaatcttattttttcattaagagattttttctttgtgaaaagggaa
gggaagggtccaactgaatttacagagacactaaatcgattagctgtggtcactcttgct
atcctcattaagacacgaggaatagctgatgctgatcacttgctttatcttcaaacaatg
ctagagcagacaatggccaccagccaacatacttggtcagaaaaaactctgcgatacttc
ccacctgttcttcgtgaagcgttgattggaagaatagataaaagaggtgtagctattcaa
gcatggcaacaggcagaaactactgtgatcaaccaatgcaaccaacttctgtccccatca
gctgatccgacatatgtgataacctacatcagtcatagtttcccgcagcataaacaatat
ctatgtgctggtgcatggatactcatgcaagggcaccctgaaaatattaactgcacaacc
ttggcacgggtattgagagagttctcaccggaagaagtaacagctaacatttacacaatg
gtagatgtgctgcttcatcacattcagattgagcctcagcatggacattccacacaggat
attttgcttaaagtttgtgccaatctttcatttttcgtatggactcaagaattacttcct
cttgatattcttctcctagctttcattgaccgtgatgacgatcccaatgctctacgcata
gtgattagtttacttgataggcaagagcttcaacaacgagtcaaactatattgtatcaac
cgagtttcacctgagcattggcttcactctgcagtgttcaaaagaaatgatttacaaaag
gctcttgggaatcatctttcatggaaggacaggtatcctgtattttttgacgatattgca
gctcgattacttccagtaattccattgatagtttataggctcattgaaaatgatgctgta
gatcaagctgacagagtattggccatgtactctccttttttggcctaccaccctcttaga
tttacatttgttcgtgatatactcgcatacttctatggtcatctacctaacaagctcatt
gttcgaattttgtatgtacttgatatcagcaagattccattttctgagtctttcccacat
tacattagttcccctggtcctgtcatgtgcccgccaatggattactttgctaccctcttg
ttggggatagtcaataatgttataccttccttacagacatcaaaacctggaacggcaagt
gatacttcaagtaattcaatgcgtccatcgcataacaaagcccctgggacaacgccaccg
ggggcaacaagtgcttccgagagccaaaaagcattttatcaaattcaggaccctggcaca
tatactcagcttgttcttgaaacagcagtcatagaattactttctctccctgtctcagct
ggtcagattgtgtcctcgctggttcaaattgttgtcaacatacaacctactctgattcaa
tcgagcaacaattttcatggagctccgagcagtatgggacagggatcagcgttaccgacg
tctccttctggaggaagcacagactccttaaatgctggaagatcaaatacctcagcatct
ggaataaatactcctaattttgtttcacgaagtgggtatacatgccaacaactttctagc
cttatgatccaggcatgtggtcttctactagcgcagcttcctcaagaatttcatgtacag
ttgtatctagaggcatcacgcattataaaagaaacttggtggctgtctgatgcaacaaga
tccttaggcgagctaaactctgctgttggttactcgttgatggatccaacatgggcagca
caagacaatacctcaacggctattggtaacacggttgcactgcttcactctttatttagt
aacctcccacaggaatggttagaaggggcacatgtgattatcaaacatctcagacccgtc
acatcagtagcgatgctgagaatagttttccgtattatgggtccactgctccccaaactt
gccaatgctcatagccttttctgtaagactctctcctcactcttgagcgtattggtggat
gtatttgggaagaacacacaaacatcaataccagtggaagccgcagaaatatcagacctc
attgactttctgcaccatgttgtccattatgaggggcagggagggcctgttgtagctaat
agcaagcctcgacaagaagttttgggcattataggaagagctttggaaaatctgcgtcca
gatgtgcaacacctcctttcccacttgaagcctgacactagttcttctatctatgctgca
acgcatccaaagctggttcaaaacccagcttga
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