Cucurbita pepo subsp. pepo (vegetable marrow): 111809360
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Entry
111809360 CDS
T05351
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111809360
04121 Ubiquitin system [BR:
cpep04121
]
111809360
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111809360
Membrane trafficking [BR:
cpep04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111809360
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111809360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Zf_IFT144_1st
zf-RING_Vps41
zf-RING_16
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
111809360
NCBI-ProteinID:
XP_023551575
LinkDB
All DBs
Position
LG13:complement(5281050..5285382)
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AA seq
312 aa
AA seq
DB search
MFSTASLAAVDKPFFCHQCDRAVTVIVSPSSDPLCPFCNEGFLEEYENSNSNSNVNLDRG
TLLLPDPFRGFNPLVVSSSTVVDLQNPGLFSRTLSLASQSNSSVQPEPYDPFVFLQNHLR
GIFDSGADVVFEIPRHASHSGFSMPQNVGDYFIGPGLEQLIQLLADNDPNRYGTPPASKS
AIEKLPTMTVTEDLLNSEMNQCAVCIDGFEKDTEVKQMPCKHVFHDYCILPWLELHNSCP
VCRFELPTDDSDYENRTRASQVQANESSGEESGSGNRGSNSGRVERRFRVPLWWPFGGRN
DGSDSCDGNVSE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaccgccagtctcgccgccgtcgacaagcctttcttctgccaccagtgtgat
cgcgccgttactgttattgtatccccttcatcggatcctctgtgtccgttttgtaatgag
gggtttcttgaagagtacgagaattccaattccaactcgaatgtcaatcttgatcgcgga
acacttctccttcccgatcctttccgtggttttaatcctcttgttgtttcctcttcgacg
gttgttgatcttcaaaatcctggtttattttcaagaactttaagtttggcttcccaatcc
aattcgtcagttcagcctgagccgtatgacccctttgtttttcttcagaatcatttacgg
ggcatcttcgatagtggtgcggatgttgtgtttgaaattccgcgccatgcttcccactct
ggcttttcgatgcctcaaaatgttggcgattacttcattggaccaggccttgagcagcta
attcaattactggctgacaatgatccgaaccgatatggaactcctccggcgtctaaatcg
gcgattgagaagcttccgactatgactgttacagaggatcttctgaattcggaaatgaac
cagtgtgccgtctgcattgatgggtttgaaaaagatactgaggttaagcagatgccctgc
aagcatgtatttcacgattattgtatattgccttggcttgaattgcataattcatgccct
gtttgccggttcgagttgcctacagatgattctgattacgagaatcgaactcgtgcaagc
caggtgcaggcgaatgaatcttccggagaagaatcagggtcaggaaacagaggaagcaat
agtgggcgtgttgagaggaggtttagagtgccgctatggtggccgtttggggggcggaac
gatgggagtgactcctgcgatgggaatgtcagcgaatga
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