Cucurbita pepo subsp. pepo (vegetable marrow): 111809413
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Entry
111809413 CDS
T05351
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04142
Lysosome
cpep04144
Endocytosis
cpep05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111809413
04142 Lysosome
111809413
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111809413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111809413
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111809413
Membrane trafficking [BR:
cpep04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
111809413
Exosome [BR:
cpep04147
]
Exosomal proteins
Proteins found in most exosomes
111809413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
IcmW
Motif
Other DBs
NCBI-GeneID:
111809413
NCBI-ProteinID:
XP_023551631
LinkDB
All DBs
Position
LG13:complement(8617047..8629923)
Genome browser
AA seq
1733 aa
AA seq
DB search
MAAASAPITMKEAMTLPSIGINPQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVQGSTQDHLQIFNIEMKAKMKSHLMPEQVVFWKWI
TPKILGLVTQTAVYHWSIEGDSEPVKVFERTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVEQQRSQALEAHAASFAQFKLPGNENPSTLISFATKTLNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYNLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAEASSVGGFYAINRRGQVLLATVNEQTIISFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
TGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLADDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRIIVNTHAI
EPQVCLVICCISYLLPGVCIFDLTFGYLQSLVEFFGTLSREWALECMKDLLLVNLRGNLQ
IIVQVAKEYCEQLGVDACIKLFEQFKSYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQ
IKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYI
EGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQ
FLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVA
YRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWENVLNPENEYRRQLIDQVVSTALP
ESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRV
MDYINRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFAF
RVEEDAVWSQVAKAQLREGLVSDAIESFIRADDATQFLEVIRAAEDANVYHDLVRYLLMV
REKSKEPKVDSELIYAYAKIDRLTEIEEFILMPNVANLQNVGDRLYDEALYEAAKIIFGF
ISNWAKLAVTLVKLKQFQGAVDAARKANSAKTWKEVCFSCVDAEEFRLAQICGLNIIIQV
DDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRHEKLMEHIKLFS
TRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVAN
VELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYMIAVQSNNV
SAVNEALNGIYVEEEDYDRLRESTDLHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGR
WKQSIALSKKDNLYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLVRAD
VALELAWVNNMIDFAFPYLLQFIREYTGKVDELVKDKIEAQKEVKAKEKEEKDVIAQQNM
YAQLLPLALPAPPMPGMGGGPGMPGFAPPPPPMGGLGMPPMPPFGMPPMGSSY
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccagcgctccgatcactatgaaggaagccatgacgcttccgagcattgga
attaatccgcaattcatcacgttcacgcacgtgacaatggaatcagataaatatatttgc
gtccgagaaacagcaccgcagaacagtgttgttatcattgatatgaacatgccaatgcag
ccattgaggaggcctataactgcggactcagcacttatgaatcctaattctagaatattg
gctttgaaagctcaagtccagggatcaactcaagaccacctacaaatattcaacattgag
atgaaggcaaaaatgaaatcacatttgatgcctgagcaggttgtcttttggaaatggata
acccctaagatattgggcttggtcacacaaactgcagtataccattggtccattgaaggt
gattctgaacctgtgaaagtgtttgagagaacagccaatctggctaacaatcagattata
aactatcggtgtgatccttctgaaaagtggttggttttgattgggattgcacctggttca
cctgagaggccacaacttgtgaaagggaatatgcaacttttctctgtggagcagcagaga
agtcaagctcttgaagcacatgctgcatcatttgctcaatttaaacttcctggaaatgag
aacccttctactcttatatcctttgccacaaagacactcaatgctggacagatcacttcc
aagttacatgtcattgaacttggtgcccagccaggaaaaccatcatttacaaagaagcaa
gcagatctcttctttccccctgattttgctgatgactttcctgtggcaatgcagatctca
cacaaatataatttgatctatgtgatcaccaagcttgggctgttatttgtatacgacttg
gagacagctgctgctgtatatagaaataggatcagcccagatcctatatttttgactgca
gaggcttcttcagtgggaggattttatgctataaacaggaggggtcaggtgttactggct
actgtcaatgaacaaacaattatctcattcgtcagtggccagttgaacaatttagagctt
gctgtcaatcttgctaaaagaggaaatcttcctggtgctgaaaatctggttgtccagcgt
ttccaagaactttttgctcaaacaaagtacaaagaagcagccgaattggctgctgaatct
cctcaagggatcctccgtacaccagatactgttgcaaaatttcagagtgtgccggtgcaa
actggtcaaacaccacctctactgcagtattttggaactttattaacgagagggaagctg
aatgcatttgagtcattggaactatctcgtttagttgtaaaccagaacaagaagaacctc
ttggaaaattggttggctgatgacaagttggaatgcagtgaggaactaggagatcttgtg
aagactgtggacaatgacctggctttgaaaatctatatcaaagccagagcgacgccaaag
gtagttgctgcctttgctgagcggagggaatttgacaagatccttatatattcgaaacag
gttggatacacaccggactacttattccttttgcaaacaattctccgaacggatccccag
ggagcagttaactttgcattgatgatgtcacaaatggaaggaggttgccctgttgactac
aacacaataactgatctttttcttcagaggaatttgattcgtgaggctactgctttcctg
ttagatgttttgaagccaaatctacctgagcatgctttcctccagacaaaggtcctagag
atcaatcttgtaacttttccaaatgtagctgatgccatattggctaacggaatgtttagt
cattatgatagacctcgaattgcccaactttgtgaaaaggctgggctttacgtgcgagct
ttgcagcattatacagagctaccagatattaaacgaatcattgtgaacacacatgctatt
gagccacaggtttgtctagttatttgttgtatctcttatctactaccaggagtatgtata
ttcgatcttacatttggttatctgcagtcacttgtagaattttttggtaccttgtctcgt
gagtgggctttggagtgtatgaaggaccttttgcttgtcaatctcagaggcaaccttcag
attattgtgcaggttgcaaaggaatattgtgaacagttgggggttgatgcgtgcataaaa
ctttttgaacaatttaagtcatatgagggcttgtactttttcttggggtcatatttgagt
tcgagtgaggatcctgacattcacttcaagtacattgaggctgctgcaaaaacaggacag
attaaggaggtcgaacgtgtaacaagagaatcaaacttctatgatgcagagaaaaccaag
aactttttaatggaagctaagcttcctgatgcacgtcctttaattaatgtgtgtgaccgg
tttggatttgttccagatctcacacattacctttacaccaataacatgctccggtacatt
gaaggctatgttcaaaaggtgaaccctgggaatgcacctttagttgtgggccagctgctg
gatgatgagtgtcctgaagatttcattaaaggattaattctctcagtaagatctttgctt
cctgtggagcccctagtggatgaatgtgaaaaaagaaatcggttgcggttacttactcaa
tttttggagcatctggtgagtgagggaagtcaggatgtccatgtgcataatgctctgggt
aaaataattattgatagcaacaataatccagagcacttcctcaccaccaatccgtactat
gattcccgtgttgtgggtaaatattgtgaaaaacgtgatcccactttagctgttgtggcc
tatcgacgtggacaatgtgatgatgagcttattaatgttacaaacaagaactcattgttc
aaactgcaagcaagatatgtggttgagaggatggatggtgatctctgggagaatgttctt
aaccctgaaaatgaatatagaaggcagctcattgatcaagttgtatcaacagccttgcca
gaaagcaagagtccagagcaagtttcagctgctgttaaggcttttatgacagcagacctg
ccacacgagttaattgaacttctcgaaaagattgtccttcaaaactctgcatttagtgga
aactttaatctgcaaaatctgcttatattgacagccatcaaggcagatccttccagagtt
atggactacattaacagactggataattttgatggacctgcagtcggtgaagtggctgtg
gaggcacagctgtatgaagaggcatttgcaattttcaagaagttcaacttgaatgttcaa
gctgtcaatgtcttgttggataacattcaaagtattgaaagagctgtagagtttgcattc
cgggttgaagaagatgcagtttggagccaggttgcaaaggctcaactaagggaaggattg
gtgagcgatgctattgagtcttttatccgtgcagatgatgccactcaatttctggaagtc
attcgtgccgctgaggatgcaaatgtgtatcatgacctagttaggtaccttttgatggtt
agggagaagtctaaagaacccaaggtggacagtgagctcatatatgcctatgctaaaatt
gatcggttgactgagattgaagaatttattctcatgccaaatgtggctaatcttcaaaat
gttggcgatcggttgtatgatgaagccttatatgaggctgctaaaattatatttggcttc
atatctaactgggccaagttggctgtcactcttgtaaaactgaaacagttccaaggtgct
gttgatgcagcacgaaaagcaaacagtgcaaagacatggaaggaagtgtgcttttcttgt
gttgatgctgaagaattccgcttggcacaaatatgtggtcttaacattattatccaggtg
gatgatctggaggaggtcagtgaatattatcagaatagaggatgtttcaatgaattaatc
tctctaatggagagtggactggggcttgagcgtgctcatatgggtatcttcactgagttg
ggagttttgtatgctagataccgccacgagaagcttatggagcatatcaaacttttctca
acccggctgaatattcccaagcttatacgagcttgtgatgaacagcagcattggaaggaa
cttacctatttgtatatccagtatgatgaatttgataatgctgcaactaccatcatgaat
cattctcccgaagcatgggatcacatgcagtttaaagatgttgctgtcaaagttgctaat
gtggaattgtattacaaggctgtgcatttctacttgcaagagcatcctgatcttattaac
gatcttcttaatgtgcttgcacttcgtgtagaccacacacgagttgttgatattatgagg
aaggctggtcacttgttgcttgtgaagccatacatgattgcagttcagagcaacaatgtg
tctgctgtgaatgaggccttgaatggaatatatgttgaggaggaagactatgatagattg
cgcgaatcaactgatttgcacgataattttgatcaaataggtcttgcacagaagatcgaa
aagcatgagttacttgaaatgagacgtgttgcagcctacatatacaaaaaagccggaaga
tggaagcaatccattgccttgtcaaagaaagacaatctctacaaggatgcaatggagaca
gcatcccaatctggtgaccgtgaacttgccgaggagttgcttgtttacttcatcgaacaa
ggaaagaaggaatgctttgcttcatgcctctttgtttgttatgacttggttcgggcagat
gttgctcttgaacttgcctgggtcaacaacatgatcgactttgctttcccatacctgttg
cagtttatcagagaatataccggaaaggttgatgaacttgtgaaggacaagattgaggct
cagaaagaagtcaaggccaaagagaaggaagagaaggacgttattgctcagcagaacatg
tatgctcagttgctgcctcttgctttgcctgcaccgccaatgcctggtatgggaggggga
ccaggaatgccaggctttgcgcctccaccaccaccaatgggtggattgggaatgccacca
atgccacctttcggcatgccaccgatgggtagcagctattaa
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integrated database retrieval system
