KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111809616
Entry
111809616         CDS       T05351                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03020  RNA polymerase
cpep03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111809616
  09124 Replication and repair
   03420 Nucleotide excision repair
    111809616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpep03021]
    111809616
   03400 DNA repair and recombination proteins [BR:cpep03400]
    111809616
Transcription machinery [BR:cpep03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111809616
  RNA polymerase III system
   RNA polymerase III
     111809616
  RNA polymerase I system
   RNA polymerase I
     111809616
DNA repair and recombination proteins [BR:cpep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111809616
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 111809616
NCBI-ProteinID: XP_023551729
LinkDB
Position
LG14:657912..660831
AA seq 143 aa
MADDDYNDLDMGYDDEPPEPELEEGAEEELDNNNNDDVPGEPVEAEEKEDEEPVERVRKT
SKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDG
SYEDWGVDELIVEDSWKRQVGGA
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcggacgatgattacaatgacctcgacatgggatatgacgatgagccaccagaacca
gaattggaggaaggtgctgaagaagaattggataataataacaatgatgatgttcctggt
gaacctgttgaagcagaggaaaaggaagatgaagaacctgttgaacgtgtgcgtaaaacc
tcaaaatttatgacaaaatatgaacgtgctagaattttgggtacacgtgccctccaaatc
agcatgaatgctcctgtgatggttgaattggagggcgagactgatccacttgagattgca
atgaaggagcttcgtgagcggaagatacccttcaccatccgtcgctacctgccagatgga
agttatgaagactggggcgttgatgaactgattgtggaggactcttggaagaggcaagtt
ggtggcgcttga

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