Cucurbita pepo subsp. pepo (vegetable marrow): 111809770
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Entry
111809770 CDS
T05351
Name
(RefSeq) high mobility group B protein 6-like
KO
K09273
upstream-binding transcription factor
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111809770
03021 Transcription machinery [BR:
cpep03021
]
111809770
Transcription factors [BR:
cpep03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
111809770
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
111809770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
111809770
NCBI-ProteinID:
XP_023551962
LinkDB
All DBs
Position
LG14:complement(2959249..2962354)
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AA seq
485 aa
AA seq
DB search
MASTAEIPKTKKPRNSRKALKDKNSTPEEPQSESSMVTKVTQPSEEEIVLSRNQSSAKKP
KSKAAPKKQPAKQSFDKELQEMQDMLQQLRLDKEKTEELLKAKDEMLKQKDEELKTRDME
QEKLQIEFKKLQKLKEFKPTMNFPMIQILKDKEQEKKEKKKCAEKKRPSPPYILWCKDQW
NEIKKENPEAEFKEISNILGAKWKNVTADEKKPYEERYQAEKQAYLQITSKEKRESEAMK
LLEEEQKQKTAMELLDQYLQFKGEAEKENKKKKKEKDPLKPKHPMSAFFLFSNERRASLL
AENKNVLEVAKITGEEWKNMTEKQRGPYEEMARKNKEKYMQEMEMYKQQKEEEAAILKKE
EEELMKLHKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKSVDPNKPKKPASSYILFS
KEARKSVMEERPGANNSTVNALISVKWKELSEGERKMWNDKAAEAMDAYRKELEEYNKTV
GEIKA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcttccactgctgaaattccgaaaacaaagaaacccaggaacagccggaaggctctg
aaggacaaaaactctacaccggaggagccacaatctgaatcctccatggttacgaaagtg
acacagccatcggaagaggagatcgtcctctctcggaatcaatcttcggctaagaaaccg
aaatccaaagctgcgccgaagaagcagccggcgaagcagtccttcgacaaagagttgcag
gaaatgcaggacatgcttcaacaattgaggctcgataaggagaagactgaggagcttttg
aaagccaaagatgagatgcttaagcagaaggatgaagaacttaagacgagagatatggag
caggaaaagctccagatcgaatttaagaagttgcagaagttgaaggagttcaaacctact
atgaacttccctatgattcaaattctgaaagacaaggaacaagagaagaaagagaagaag
aagtgcgcggaaaagaagaggccatctccaccttacatcttatggtgcaaagatcaatgg
aacgagatcaagaaggagaatccagaggcagagttcaaggagatctcgaacattttgggg
gcgaagtggaagaatgtcacagcagatgagaagaagccatatgaggagaggtatcaggct
gaaaaacaagcctatttgcaaatcacttctaaagagaagcgtgaaagtgaggcgatgaag
ctgttagaagaggagcagaagcagaagacagccatggagctgcttgatcaataccttcaa
ttcaaaggggaagccgagaaagagaacaagaagaagaagaaagagaaggatccattgaag
cccaagcatcctatgtctgcattctttctcttttcaaatgagaggcgtgcatcccttctt
gccgaaaacaagaatgttctagaggtagcgaagataacaggtgaggagtggaagaacatg
acagagaaacagagaggtccttacgaagagatggcgaggaagaacaaggaaaagtacatg
caggaaatggaaatgtacaagcagcaaaaggaggaggaagcagcaatcctcaagaaggaa
gaggaagaactaatgaagcttcataaacatgaagctctgctgttgctgaagaagaaagag
aaaaccgagactataataaagaaaacaaaagaggagcggcagaagaagaagaaggaaggg
aagaagagtgttgatcctaacaagcccaagaagcctgcatcctcttacatcctgttcagc
aaagaagcaaggaaaagtgtaatggaggagaggccaggagccaacaattccacagtgaat
gcactgatttcagtgaaatggaaggaactaagtgaaggggagaggaagatgtggaatgat
aaagctgcagaagccatggatgcttacagaaaggaattggaggaatacaacaaaactgtt
ggtgaaattaaggcctga
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