Cucurbita pepo subsp. pepo (vegetable marrow): 111809862
Help
Entry
111809862 CDS
T05351
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 2-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111809862
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111809862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
FlgT_M
TEX13
UPF0242
WHD_MCM8
Motif
Other DBs
NCBI-GeneID:
111809862
NCBI-ProteinID:
XP_023552087
LinkDB
All DBs
Position
LG14:complement(3664444..3668644)
Genome browser
AA seq
525 aa
AA seq
DB search
MPLISIVLGTHFYELEHLCVLNHSPIALSHWCIFHRGKAELVVATWDKQFHDSEMAQKVP
LLYLANDILQNSKRKGNEFVSEFWKVLPSALKDVLDHADNHGKNVISRLVDIWEHRKVFV
SRTRSLKDVILGEEAPPPLAFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFYLVL
SECSNEETEMTNCNSAVQRVRKMENTVDVACSVAKNPQRNKLAKELEEEESILKQCIEKL
QSVEANRMALISHLKEALHVQESELENIRTQMQVAQAQAEDAKNMQNRLNDEGYLLKRST
IDSNAKAGRSPNKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTVLTKTNNGS
NAFTPNPVRSANSITKPEASAIVSDPNVFMSMQPLPAPANHSYQSVMVPQPAMQSQAPNS
QTPYQMLPNTPSQPYMQLSNGVLTPYGYGRLPSSTPVPPPPIPRMVSPMVSLTQQMLQQP
MPLAQQPSPMIQTQPVPFAQQPLAPSFRPLQPPGMVYYGHLPPSQ
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgatttccattgttttgggtactcatttctatgaattagagcatttatgtgtt
cttaaccattctcctatagctttatcacattggtgtatatttcatagaggcaaggctgaa
ctggttgttgcaacatgggataagcaattccacgattcagaaatggcccagaaagttcct
cttctgtatcttgctaatgatatcttacaaaacagcaagcgtaagggaaatgaatttgtt
tctgagttctggaaggttcttccatcagcgcttaaggatgttcttgaccatgctgacaac
catggaaagaatgtgatttccagattggtagatatatgggaacataggaaggtatttgta
tcccgaactcgaagtctcaaagatgtaatacttggggaagaggcacctccgcctctagca
ttcagtaaaaaacgtactcgatcagtcagaatagtcaaaagagattcaaggtcgattaga
acgaaactgtctattggaagtgcagctgaaaaaattgtatcagcattctacctggttttg
agtgaatgttctaatgaagaaactgagatgaccaactgtaactctgcagttcaacgtgta
cggaagatggaaaacaccgtggatgttgcttgttccgtggcgaagaatcctcagcgtaac
aagttagccaaagaactggaagaggaagaaagtattctgaaacagtgtattgagaaacta
caatcagttgaagccaatcggatggcacttatatctcatttaaaagaagccctgcatgtt
caggaatcagagctagagaatattcgaactcagatgcaggtagctcaggctcaggcagag
gatgctaaaaatatgcaaaatcggttaaacgatgaaggttatctattaaaacgttccaca
atcgattcaaatgcgaaagctggacggagtcctaacaagtctgctgcagccattgcagca
gaggttgctgacaagctcgcagcttctagctcgtctcaaatgatcatgacatcggttctc
tccacatttgcagctgaggaggcaaagaatactgttctaacaaagaccaataacggatcg
aatgcgttcacgcccaaccccgtgcgctctgccaattctattacaaaacctgaagcatca
gccattgtttcagatcctaatgttttcatgtctatgcagccccttcctgcaccagctaac
cattcatatcaatcagttatggtgccccaaccggcaatgcaaagccaagcccccaattca
caaactccatatcagatgcttccgaacacgccttcccagccatatatgcagctctcgaat
ggcgtcttaaccccatatggttatggtagacttccaagctcgactccggtaccaccaccg
cctattccccgtatggttagtccaatggtgtccttgactcagcagatgctgcaacagcca
atgcccttagctcagcagccatcacctatgatacaaacacaaccagtccctttcgcgcag
caaccattagcacctagtttccgaccgcttcagccgcccgggatggtgtattatggacac
cttcccccttctcagtga
DBGET
integrated database retrieval system
