Cucurbita pepo subsp. pepo (vegetable marrow): 111809914
Help
Entry
111809914 CDS
T05351
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111809914
Membrane trafficking [BR:
cpep04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111809914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
DUF5591
Motif
Other DBs
NCBI-GeneID:
111809914
NCBI-ProteinID:
XP_023552152
LinkDB
All DBs
Position
LG14:7924696..7933016
Genome browser
AA seq
1441 aa
AA seq
DB search
MAPNPPPFQVEDQTDEEFFDKLVEDEYVEGDDSGSKFLDGNDSDDAKAFSNLSMNDADNT
FKDSGGVGDHGHEAIGEKGFVEADPGALGAHAEEKAALVSSNSVGGNDDFGSESTSDSLA
GKSGESGGPAIKEVGWSSFHAGSSQNWGQGFGSYSDFFNDLGNNDAGPLSGSLENNLNGE
TMVKSSAEENHANNSVNYVPYQNDHQVYEGSTDQNDHQVYEGSTDRNDHQVYEGSTHQVS
AENDLSSSQQWEDLYPGWKYDSVSGQWYQVENSVAVANVQATFDSNLNGEWPDVSATKTE
VAYLQTAQSVVGTVTEASTTEGVSNLNHVSQGNTGYPEHMYFDPQYPGWYYDTISQVWCS
LESYNSSIKTTNEAQHNQNEHVSAYSYNYSNSSMYGDNVQPNDYGSSDVNNQGLDDKLIG
SHHNENQQSLTSWPTESVSSQAEPTFGGKQLVDTSSSPDFSVRNEQQKSISSYGTVPSYF
QPSQGRSDVNGPTSLNSFPSTMDYGHQVHRENSKEHEHVSLSSDYYSNQKQVTNIQQSFH
GGHHQSSYASNVGRSSAGRPPHALVTFGFGGKLVVVKESSSFGNSTYGSQDPVGGTISVL
NMMEVVMGNTNANAIGNNVGASDYFSAICQHSFPGPLVGGSVGNKELQKWIDERIANCES
SGMDYRKGEALRLLLNLLKIGHQHYGKLRSPFGTDTVLGESDNPESAVANLFASAKENGV
QFNNYHSLSHCLQILPSEGQIRATASEVQSHLVSGRKKEALQCAQEGQLWGPALVLASQL
GNQFYIDTVKQMALKQLVPGSPLRTLCLLIAGQPAEVFSTVTTPNINPLGGSMTQNSSQF
SANSMLDDWEENLAVITANRTKDDELVIIHLGDSLWKERSEITAAHICYLVAEANFESYS
DSARLCLIGADHWKFPRTYASPEAIQRTELYEYSKVLGNSQFILLPFQPYKLIYAYMLAE
VGKVSDSLKYCQAVLKSLKTGRAPEVETWKQLLFSLEERIRAHQQGGYTANLAPAKLVGK
LLNFFDSTAHRVVGGLPPPIPSTSHGNIHDNEHYHEPVVPRVSTSQSTMAMSSLIPSASM
EPISERTADSSKMTVSNRSVSEPDFGRTPRQNQISSSKESMSADSQGKTSDSRASRFTRF
GFGSQLLQKTVGLVLRPRLGRQAKLGDKNKFYYDEKLKRWVEEGAESPAEEPALPPPPTT
TTFQNGGADYNLRSTLKKEAPSHDGNVEFASPNPIPAENSSGIPPIPPSSNQFSARGRMG
VRSRYVDTFNQGSGSSANLFQSPSVPSIKPKVAASAKFFVPSPALPAEPTEETIPESSRE
DTTTIEHPSTSTTNDSFSSPSSTIPMQRFPSLGNISVKGANKSVNGPFATDNSRRTASWS
GANFSDALSPPHKPTGLKPLGEELGMPPSSFMPSEPPPPPFIQAPITGGGGMGDDLHEVE
L
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaatcctcctccatttcaggtggaggatcagacagatgaagaattctttgat
aaattggtggaagatgagtatgtggagggcgatgattcaggatccaaattcctcgatgga
aatgattctgacgatgccaaggcgttttctaatctgagtatgaatgatgcagacaataca
ttcaaggattctggtggtgttggtgaccatgggcatgaagccataggggagaagggcttc
gtggaggctgatccaggggcattgggagcacatgcagaagagaaggctgctttggtttct
tctaattctgtagggggtaatgatgattttggatcagagtcgacctccgattcgttggcg
ggcaagagcggtgaatctggtggtccggccataaaggaggtaggatggagttcgtttcat
gctggttcatcgcaaaattgggggcaggggtttggatcatattcggattttttcaatgat
ttgggtaacaatgacgcagggcctctcagtggatccttggagaataatttgaatggtgaa
acgatggttaaatctagtgcagaagagaaccatgcaaacaactctgttaattatgtgcca
tatcaaaatgatcatcaagtttatgaaggatccacagatcaaaatgatcatcaagtttat
gaaggatccacagatcgaaatgatcatcaagtttatgaaggatccacacatcaagtttcg
gctgagaatgatttgagtagcagtcagcagtgggaagatctctatccagggtggaaatat
gattcggtttcggggcaatggtatcaagtagagaactctgttgcagtggcgaatgtccaa
gctacctttgatagtaatttgaacggcgaatggcctgatgtttctgccacaaaaacagag
gtggcatatttacaaactgctcagtctgttgttggcactgtaactgaggctagcacgaca
gagggtgtttctaacttgaatcatgtatcacaaggaaatactgggtaccccgaacatatg
tatttcgatcctcaataccccggttggtattacgacacaatttctcaagtatggtgctcc
ttggaatcctataattcatcaattaaaacaactaatgaagctcagcataatcaaaacgag
catgtatcagcttatagctataattatagcaacagtagtatgtacggtgataatgtgcag
cctaacgattatggatcgagcgatgtgaataatcaaggcctagatgacaaattgataggg
tctcaccataatgaaaatcaacagagtttgactagctggccaacagaaagtgtttcatct
caggctgagccaacttttggtggaaagcagctagtggatacgtcttcgagtcctgatttt
tctgtaagaaatgagcagcagaagtctattagttcttatggaacagttccatcatatttc
caaccaagtcagggtcgtagtgacgtcaatggacctaccagcttaaatagcttcccctca
actatggattatggtcatcaggttcatcgggaaaattcgaaggaacatgaacatgtgtct
ctatcgagtgactattatagcaatcagaaacaggtgactaatattcaacaatcttttcac
ggaggtcatcatcagtcttcttatgcttcaaatgttggaagatcttctgctggacgtcct
ccacatgcattggtaacatttggatttggaggtaaacttgtagtggtgaaagaaagcagc
tcgtttggaaactcaacttatggtagtcaggatcctgttggaggcacaatttctgtcctg
aacatgatggaagttgtcatgggtaacactaatgccaacgctattggcaataatgttggt
gcaagcgattacttcagtgctatctgccaacattcctttcctggtccattagttggtgga
agtgtggggaataaagagttgcagaaatggattgatgaaaggattgcaaattgtgaatca
tcaggaatggattacagaaaaggcgaagcattgaggctgcttcttaatttgcttaaaata
ggccatcagcattacgggaaactccgatcaccatttggcacagacactgtgttgggggaa
agtgataatccagaatcagcagttgccaatctttttgcttctgccaaggagaatggtgtg
caattcaataattaccattcgcttagtcactgcttgcaaatattgccttctgaaggacaa
atacgggcaactgcttctgaggttcaaagtcatctagtatctggtagaaaaaaagaggct
ttacaatgtgcacaagaaggtcagttatggggacctgcccttgttcttgcttcacagctt
ggcaaccagttttacattgatactgtaaagcaaatggctcttaagcaattggtacctgga
tcgcctttgcggaccctatgcctgcttatagctgggcaaccagcagaagtcttttctaca
gttacgacgcctaacatcaatcctctgggtggtagcatgactcaaaactcttcacagttt
tctgcaaatagtatgctggatgattgggaagaaaatttagcagtgataactgccaacagg
acaaaagatgatgaacttgtaattattcaccttggagactccttatggaaggaaaggagt
gagataactgctgctcacatttgctatttagttgccgaggcgaacttcgagtcatattca
gacagtgctagactctgtcttattggagctgatcactggaaatttcctcgtacctatgct
agcccagaggctatccagagaactgaattatacgaatactccaaagttcttggaaactct
cagttcatccttctaccatttcagccatataagctcatatatgcatacatgttagcagaa
gtggggaaagtttcagactcattgaagtattgccaagcagttttgaagtcacttaaaact
ggtcgtgcacctgaagttgaaacatggaagcagttgctgttttctcttgaggagaggatt
agagcccatcaacagggtggatacacagcaaatttggcccccgcaaaattagtcgggaaa
ctgctcaacttttttgacagtaccgcacatcgtgttgtcgggggcttgccacctcctata
ccatcaacttcacatggcaatattcatgataatgaacattatcatgagccagtggtcccg
agagtatcaactagtcagtcaacaatggcgatgtcatcgttaattccatctgcttcaatg
gagcccataagtgagcggactgccgatagcagtaagatgacagtttcaaacaggagtgtt
tcagagccagattttggaagaactccaagacagaatcagatcagttcttcaaaggaatca
atgtcagctgatagtcaaggaaaaacatcagattcaagagcatctcgttttactcgtttt
ggttttggttcacaattgcttcaaaagactgttggattagtcttgagacctcgcctgggt
cgacaggcgaaattgggtgacaagaacaaattttattatgatgaaaagctgaagagatgg
gtcgaggaaggtgccgagtctccagcagaagagccagccttaccaccacctcctacaact
acaacattccagaatggtggtgctgattacaacttgagatctacactaaagaaagaagca
ccatcccatgatggaaatgtggagtttgcaagtcccaatcctattcctgcagaaaatagt
tccggaatcccccctatcccaccaagttcaaaccaattctcagctcgaggacggatgggc
gttcgttcaaggtatgttgacaccttcaaccaagggagtgggagctcagcaaacttgttt
cagtcaccttccgttccatcaattaagccgaaggttgctgccagtgcgaaattctttgtt
ccaagtcccgcattgccagccgaaccgacagaggagactataccggaatcctctcgggaa
gacaccacaaccattgaacatccttcaacatccaccaccaacgattcattttctagtccc
tcatcaactatccctatgcaaaggttccctagcttgggaaacatctcagtgaagggtgca
aataaaagtgtcaatgggccctttgcaacagataactcccgacgaactgcatcatggagt
ggtgcaaacttcagtgatgccttaagcccccctcataaaccgacggggcttaaacctctc
ggcgaagaattgggtatgcctccatcctcttttatgcctagcgaaccaccaccaccacct
ttcatccaagcaccaattactggcggtggtggcatgggagatgacctccatgaggtggaa
ctttaa
DBGET
integrated database retrieval system
