Cucurbita pepo subsp. pepo (vegetable marrow): 111809928
Help
Entry
111809928 CDS
T05351
Name
(RefSeq) protein argonaute 7-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111809928
03036 Chromosome and associated proteins [BR:
cpep03036
]
111809928
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111809928
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111809928
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111809928
microRNA pathway
RISC loading complex
111809928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
111809928
NCBI-ProteinID:
XP_023552174
LinkDB
All DBs
Position
LG01:8884344..8888398
Genome browser
AA seq
1022 aa
AA seq
DB search
MEDSDEPNATSKCNNKTGSFKARINLHPPPPPPPPHHHHHHVHRHYQHQQLWQYSNQYAF
CNQNQFQRCCPVILPLPLPLPPPIPLQLALAPALPPNRTTTRPKAHLQKASCRVNNPPLA
VTSDTHVPILKISPAPKGLLRLKSTLPLKGDNGKVSESKPEVLVAARRPDSGGVEGPVIP
LLANHFLLQFDPSQRIYHYNVEISPNPSKEVARLIKQKLVEDNSDLLSGASPAYDGRKNL
YSPIEFVRDRLEFYVSLPLPSSRMKVTQGEIEHKQAFKLFRISIKLVSKIDGMELNRYLS
KEGDDWIPIPQDYLHALDVVLREGPNEKCISVGRSLYSSSMWGSKEIGGGVVGLRGFFQS
LRPTQQGLAMNVDCSVTTFHESIGVIPYLQKRLDFLGDLSQRKTRGLTSEERREVEKALM
HIRVFVCHRESVQKYKVYGLTDEPTESLWFADRNGKNLRLVGYFKDHYNYDIQFRNFPCL
QISRSKPCYLPMELCMICEGQKFLGKLTDEQTARMLKMGCQRPKERKANIDGVMQGSFMP
TSGVQGREFSLQVSKEMTKLSGRVLQPPKLKLGDGGQVRDLIPSRHDRQWNLVDCHVFEG
TRIERWALISFGGSLDQRSNIPRFINQLSRRCDQLGIFLNSKTVVPPQFEPTQVLNSVTL
LESKLKKLIGAASNSLQLLICVMDRKHKGYADLKRIAETSIGIVSQCCLYPNLAKLGSQF
LANLALKINAKVGGCTVALYNSLPSQVPRLLRINKPVIFMGADVTHPHPLDDFSPSIAAV
VGSMNWPAANKYVSRMRSQTHRQEIIMDLGAMVEELLEEFYQEVNELPSRIIFFRDGVSE
TQFYKVLQEELQAIKTACSRFHNYKPPITFAVVQKRHHTRLFPFKVDPSSNQTEVLDENI
PPGTVVDTVITHPKEFDFYLCSHWGVKGTSRPTHYHVLCDENQFTSDELQKLVYNLCYTY
NRCTKPVSLVPPAYYAHLAAYRGRLYLDRSDSTATTVSRAAPPKTMALPKLSENVRKLMF
YC
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggaagactcagacgagcccaacgctaccagcaaatgtaacaacaaaactgggagtttc
aaagccaggattaaccttcatcctcctcctcctcctcctcctcctcatcatcatcatcat
catgttcatcgccattatcagcatcaacagctatggcagtactcaaatcagtacgccttt
tgtaaccaaaaccagttccaaagatgctgtcctgttattctacctcttccccttcctctt
cctcctcctattcctctgcaactcgctctagctcctgctcttcctccaaatagaaccacc
actagaccaaaagcccacttgcagaaggcttcctgtagggtcaataaccctcctcttgct
gtcacctctgatacccatgtccctatattaaagatttctccagctccaaaagggctacta
cgactgaaaagcactttgccacttaaaggagataatggaaaggtgagtgaaagtaaacca
gaggtattagtggctgcaagaagaccagattctggaggtgtagaagggccagttattcct
cttttggctaaccatttcctactccagtttgacccttcacaacgtatttaccattacaat
gtggaaatctctcccaacccttcaaaagaagttgccagattgatcaaacaaaaacttgta
gaggacaactcggatttgctctctggggcctctcctgcttatgatggccgcaagaatctt
tacagcccaattgagtttgtaagagacaggcttgagttctatgtcagccttccacttccc
tccagcaggatgaaagtaacccaaggagagatcgaacataagcaagcattcaaactcttc
cggataagtattaaacttgtctcaaaaattgatgggatggaactgaatagatacttgtca
aaagagggagatgattggattccaattcctcaggattatcttcatgctttagatgttgta
ttgagggagggcccaaatgagaaatgcatctctgtgggaagatctctgtattcaagttca
atgtgggggagcaaagaaattgggggaggagttgttggcttgagaggctttttccaaagc
cttagacccacacagcaaggcttagctatgaacgtagattgttctgtcactactttccat
gagagcattggagtgattccctacttgcaaaaacgtcttgattttcttggagacctttct
cagaggaagacaaggggcttgaccagtgaagaaaggagagaagtggagaaggctttgatg
catattagggtttttgtttgtcacagagagagtgttcagaaatacaaagtttatggctta
acagatgaacctactgagagtctctggtttgcagacagaaatgggaagaatctaagattg
gtgggttacttcaaggatcattataactatgacattcaattcaggaattttccttgcttg
cagattagtaggagcaagccatgttatcttcctatggagctttgtatgatttgtgaaggg
cagaaattccttggaaagctcactgatgaacagactgcaaggatgcttaagatgggttgc
cagaggccaaaggaaaggaaagctaatatagatggtgtcatgcaaggttcttttatgcca
accagcggggtccagggaagagaattcagcctccaagtctccaaggaaatgaccaaatta
agtgggagagttcttcaacctcccaagctaaagcttggtgatggcggccaggttcgagat
cttattccctcccgccacgaccgccagtggaaccttgtcgattgccatgttttcgaggga
acaagaatcgagaggtgggcattgataagcttcggcggtagcttagatcagaggtctaac
attccaagatttataaaccagctctcaagaaggtgtgaccaattaggcatatttctcaac
agcaaaacagtcgtaccacctcaatttgaaccaactcaagtactcaacagtgtcacgctg
ttggaatcaaagcttaagaagcttattggagctgcatctaacagccttcagctcttgatc
tgtgtgatggatcggaagcataaaggctatgcagatttgaaacgcatcgccgagacgagt
atcggcattgttagtcaatgctgcctctatccaaatcttgccaagctaggctcccaattt
ctggccaatttggctcttaagatcaatgcaaaggttggtggttgcactgttgcattatac
aactcgttaccttcccaagtaccacggctgcttcgtatcaataagcccgtgatcttcatg
ggcgccgatgtaactcatcctcatcccttggatgattttagcccctccatagctgctgtg
gttggtagcatgaattggccagcagcaaacaagtacgtctctagaatgagatcacaaaca
cacagacaagaaattattatggatctcggagcaatggtcgaagagctgctcgaggaattt
tatcaagaagtgaacgaacttccatcacgaattatattcttcagagatggcgtgagcgaa
acccagttctacaaagtgcttcaagaggaattgcaggctataaaaacagcttgttctcga
ttccacaactataaacctcctataacttttgctgttgttcaaaagaggcatcacacaaga
ttattcccattcaaagtcgatccatcttcaaaccaaactgaggttcttgatgaaaacatt
cctcccgggacggttgttgatactgtaattactcacccaaaggaattcgatttctatctc
tgcagccactggggggtgaagggaacaagcaggcctacgcattatcatgtcttgtgtgat
gaaaaccagtttacttctgatgaacttcaaaagctggtttacaacttatgctacacatat
aataggtgcacgaagcctgtttcactagtacctccagcttattatgctcatcttgctgct
tatagaggcagactttacctcgatcgatccgattcgacagccactaccgtctctcgagct
gcccctccaaaaacaatggctctaccaaaacttagcgaaaatgttaggaaactaatgttt
tactgttga
DBGET
integrated database retrieval system
