Cucurbita pepo subsp. pepo (vegetable marrow): 111809958
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Entry
111809958 CDS
T05351
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111809958
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpep04147
]
111809958
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
111809958
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111809958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EF3_N
HEAT
HEAT_EZ
HEAT_2
HEAT_ECM29
Cnd1
TOR1L1_N
CEP104-like_TOG
HEAT_DAAF5
GNC1_N
TTI1
Htt_N-HEAT_1
MMS19_N
PPP2R1A-like_HEAT
Dopey_N
Motif
Other DBs
NCBI-GeneID:
111809958
NCBI-ProteinID:
XP_023552220
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Position
LG14:4285732..4313663
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AA seq
1218 aa
AA seq
DB search
MANLAMTGILEKMTGKDKDYRYMATSDLLNELNKETFKADTELETKLSNIIIQQLDDAAG
DVSGLAVKCLAPLVKKVSETRVVEMTNKLCGKLLNGKDQHRDVASIALKTVVAEVSVPSL
AQSILITLSPQLIKGITTAGMSTEIKCESLDILCDVLHKFGNLMTNDHELLLSALLSQLG
SNQASVRKKTVSCIASLASSLSDDLLAKATTEVVRSLRIKSTKAEITRTNIQMIGALSRA
VGYRFGPHLGDTVPVLINYCTSASESDEELREYSLQALESFLLRCPRDISSYCDNVLYLT
LEYLSYDPNFTDNMEEDTDDEIHEEEEEDESANEYTDDEDLSWKVRRAAAKCLSALIVSR
PEMLSRLYEEACPKLIDRFKEREENVKMDVFSTFIELLRQTGNVTKGQVDMNELSPRWLL
NQEVPKIVKSINRQLREKSIKTKVGAFSVLKELVVVLPDCLADHIGSLIPGIEKALSDKS
STSNLKIEALIFTRLVLASNSPSVFHPYIKDLSSPVLSAVGERYYKVTAEALRVCGELVR
VVRPGIEGQGFDFKQYVHPIYNAIMSRLTNQDQDQEVKECAISCMGLVVSTFGDNLKAEL
ATCLPVLVDRMGNEITRLTAVKAFAVIAASPLQIDLSCVLEHVISELTAFLRKANRSLRQ
ATLGTLNSLIAAYGDKIGPSAYEVIIVELSTLISDSDLHMTALALELCCTLMADRRSSSS
IGLAVRNKVLPQALLLIKSSLLQGQALVALQSFFAALVSSANTSFDALLDSLLSCAKPSP
QSGGVAKQALFSIAQCVAVLCLAAGDQKYSSTVKMLTEILKDDSSTNSAKQHLALLCLGE
IGRRKDLSAHAHIENIVIESFQSPFEEIKSAASYALGNIAVGNLSKYLPFILDQIDNQQK
KQYLLLHSLKEVIVRQSVDKAEFQDSSVEKILNLLFNHCESEEEGVRNVVAECLGKIALI
EPGKLVPALKVRTTSPAAFTRATVVIAVKYSIVERPEKIDEIIYPEIASFLMLIKDHDRH
VRRAAVLALSTFAHNKPNLVKGLLSELLPLLYDQTIVKQELIRTVDLGPFKHVVDDGLEL
RKAAFECVDTLLDSCLDQVNPSSFIVPYLKSGLDDHYDVKMPCHLILSKLADKCPSAVLA
VLDSLVDPLQKTINFKPKQDAVKQEVDRNEDMIRSALRAIASLNRISGGDCSLKFKNLMN
EISKSPALSEKYYSIRNE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttagcgatgacgggtatcctagagaagatgacaggcaaagataaagattac
agatacatggcaacatctgatctattaaacgagttaaacaaagagacttttaaagctgat
actgagctggagacaaaactgtcaaacataatcatacaacagcttgatgatgcagccggt
gatgtttctgggttggctgtgaaatgccttgctccattagtgaagaaggttagtgaaaca
cgggtcgtggagatgacaaataaactttgtggcaaattgctcaatgggaaggatcagcac
cgtgatgttgccagcatagccttaaagacagttgtagctgaagtttctgtgccatccctt
gctcaatctattctcatcactctttcaccccaattgataaaggggatcactactgctgga
atgagcacagagataaaatgtgagtcccttgatattttatgtgacgttcttcacaaattt
ggaaacctcatgacgaatgatcacgagcttctgttaagtgcattattatcccagttgggt
tccaatcaagccagtgttagaaagaagactgtgtcgtgtattgcctctcttgcttcgagc
ttatcagacgatttgttggcgaaggcaacaactgaggttgttagaagcttgagaattaaa
agtaccaaagcagaaattacacgcacaaatatccaaatgattggtgctttgagccgtgca
gttggatatcgttttggacctcatcttggggacactgttcccgtgcttatcaattattgc
acaagtgcttctgaaagtgatgaagagcttcgtgagtacagtttacaggctcttgaaagt
tttcttctaaggtgccccagggatatttcgtcctattgtgataacgttctttatcttacc
ttggagtatttaagttatgacccaaattttactgataatatggaagaagatactgatgat
gagattcatgaagaagaggaagaagatgaaagtgccaatgaatatacagatgatgaagat
ctcagctggaaagtccgacgagcagctgctaaatgcttatcagcattaattgtatcacga
ccagagatgctttcaagactatatgaggaggcttgtccaaaattgatcgatagatttaaa
gagagggaagaaaatgtcaagatggatgtatttagtacttttattgaactgttgcgccaa
actggaaatgtaacaaaagggcaggttgacatgaatgaattaagtccaaggtggttgtta
aatcaagaagtgccaaagattgtgaaatctataaataggcagctacgggagaaatctatc
aagacaaaggttggtgccttttccgtcttgaaagagcttgtggttgtcttgcccgattgt
cttgctgatcacatcggatcgctcattccaggaattgaaaaagcattaagtgataaatca
tcaacctcaaatttgaagatagaagctcttattttcactagattggtgttggcttcaaat
tctccttcggttttccatccttatatcaaggatctctcaagtcctgttttgtctgctgtt
ggagagcgttattacaaggttactgctgaagcattgagggtatgtggggaactcgttcgg
gttgttcgtcctggtattgaggggcaaggttttgacttcaaacaatacgttcatcctata
tataatgctataatgtcacgcctgactaatcaagatcaagatcaggaagtcaaggagtgt
gccatctcttgcatggggcttgttgtgtctacatttggtgacaacctcaaagcagagtta
gcaacctgccttccagttcttgttgatcggatgggaaatgagattacccggcttacagct
gttaaggcatttgctgtcattgctgcttctccacttcaaatagacctgtcatgtgtttta
gagcatgtcatatcagagttgacagcgtttctccgtaaggccaatcggtcattgagacag
gcaactctggggactctaaattcacttatagctgcttatggcgataaaattggcccttca
gcatatgaagtcattattgtggaactttcaactttgataagtgattcagacttgcatatg
acagctcttgcattggagttatgctgcaccttgatggctgacaggaggtctagctcaagt
attggtttggccgttcggaacaaagtccttcctcaggcacttctgctaatcaaaagttca
ctcctgcaggggcaggcacttgtggctttacagagcttttttgctgcattggtctcttct
gcaaataccagctttgatgccttgctggactctcttctttcatgtgccaaaccatcacct
caatcgggtggtgtcgcaaaacaagctttattttcgatagcccaatgtgttgctgttttg
tgtcttgccgctggtgatcaaaagtattcttcaacagtaaaaatgctaacagaaattctg
aaagatgatagcagtacgaattctgctaagcagcaccttgctttactctgtcttggggag
atcgggagaaggaaggacttgagcgcacatgctcacatagagaatattgttattgagtca
tttcaatctccctttgaagagatcaagtctgctgcctcctatgctctgggtaatattgct
gttggtaatttatccaaatatttgccttttatattggaccagattgataatcagcagaag
aaacaatatctcttgcttcattcactgaaggaggtgatagttaggcaatctgtggataaa
gcagagtttcaagactcaagtgttgagaagatacttaatctactctttaatcattgcgaa
agtgaggaagagggagtcaggaatgttgtagcggagtgcctcggtaaaattgctcttatt
gaacctggaaaacttgttcctgctctcaaggtaaggacaacaagtccagcggcattcact
agagcaactgttgtaattgcagtcaagtattccatagttgagcgacctgagaagatagac
gagattatataccctgagattgcgtcattcctgatgcttataaaggatcatgatcgtcat
gttagacgtgctgctgtcttggccttgagtacatttgcccacaataagcctaaccttgta
aaggggcttctttctgagttattaccgcttctttatgatcaaacaattgtgaagcaagaa
ttgataagaacagttgatctcggtccctttaagcatgttgtggatgatgggcttgagttg
cggaaggctgcttttgaatgtgtggatacattgctagatagttgtctcgaccaagtgaac
ccatcatctttcattgttccttatcttaaatctggtttggatgatcactacgatgttaaa
atgccatgccatctgattctatcaaaacttgctgataagtgcccatcagctgtattagca
gttttggactctctggttgatcctcttcaaaagactataaacttcaagccaaagcaagat
gctgttaaacaagaagtagatcgtaatgaggacatgattcgcagtgctctacgggcaata
gcatctctaaatcgcataagtggaggagattgcagccttaagttcaaaaatcttatgaat
gaaatttctaaatctccagcactctcggagaaatactactcgatccgaaatgagtga
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