Cucurbita pepo subsp. pepo (vegetable marrow): 111810003
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Entry
111810003 CDS
T05351
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpep01002
]
111810003
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111810003
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111810003
Peptidases and inhibitors [BR:
cpep01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111810003
Ubiquitin system [BR:
cpep04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111810003
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
GFA
VanW
Motif
Other DBs
NCBI-GeneID:
111810003
NCBI-ProteinID:
XP_023552299
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Position
LG14:8104871..8109569
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AA seq
652 aa
AA seq
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MATHLAESQEADRYLVPPLEIEGGYWQSTTDQALTQQSLPPPSSCGGGDFSFSPIDGSAN
QSWGTSSINPNGSSSFSIYSSDSDALVPLPSLPVSSFVDNSLNCSSEQGFPTSSVAAQGA
KSLSVGAGLANMGNTCFINAILQCLTHTAPFVEGLRSVTHDMPCNSEDLCVLCAIRDHIE
LSLTSMGGIISPLRLVDNLNYFSSCFRRYQQEDAHEFLQCFLDKLERCLVREAKDQISFE
DDDDLVNNVFGGRLISNLCCCNCGHCSETHEPLVDLSLEIENVDSLSSALESFTKVEKIG
DPETKFKCENCKEEVLVEKQLKLEKIPLVTTFHLKRFKADSSFVEKIEKHLEFPLELDLQ
PYSVRGRDAEVELKYELYAIVEHTGFSSTSGHYFSFVRSSPDTWHRMDDSMVTPVSEDYV
LSREAYILLYKRKGTSWFSSLIQQRDPCLNSCSDTLHSIDTVRSSLSAESIVNCETTNVP
VDTLRLSPAQFSVEMGEQDTGANDLGNPTSANLHIFESAALESSPIVPKNLCSNGNDEGI
DGFRPLSPTRSPSPDIVFQTPEPQYQIPVSHLKTEKCSTSGRPSNKGVEDPERKAALRYI
KKSMPGSRGLKMINAILGPQNEGPLNKKKRLRSLPCKRSSPPNNRRKTSIVL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccatctggcggaatctcaagaagccgatagatatttggttcctccgttggaa
attgaaggtgggtattggcagtcgactactgatcaagccctaactcagcaatctctgcct
ccgccgtcgtcttgtggaggtggggatttttccttttcgcctattgacggctctgctaat
cagtcttggggtacttcttcgataaaccctaatgggtcttcgtcattttcaatttactcg
tctgattctgatgcactcgtgccattgccctctttgcccgtttcatcattcgttgacaat
tcattgaattgttcttcagaacaaggtttcccaacaagttcagtggctgcccaaggagcc
aaatctttatcagtgggtgcggggcttgcaaatatgggtaatacttgctttataaacgca
atcctgcagtgcctcactcatactgctccatttgtggagggtcttcgatctgtcactcat
gatatgccttgtaacagtgaagatctttgtgttctttgtgcaattcgtgatcatatcgag
ctctccttaacatctatgggcgggattatctccccacttcgacttgttgataacttgaac
tacttctcgtcttgttttcggagataccagcaggaagacgcccatgagttcctgcagtgc
ttcttggataaactcgaaagatgcctggtaagagaagccaaggatcaaatttcttttgag
gatgatgatgatctagtgaataacgtgtttggtggtcgtctcataagcaacctatgctgc
tgtaattgtggccattgttctgaaacccacgagcctttggtcgacctgagcttggagatt
gagaatgtcgactccctttctagtgctttggagtctttcaccaaggtggagaagattggt
gatccagagacaaaatttaagtgtgaaaactgcaaagaagaggtgttggtggagaagcag
cttaagctcgaaaagatccctttggttactacattccacttaaagagattcaaggctgat
agttctttcgtcgagaaaatcgaaaagcacttggagtttccgttagagttagatttgcag
ccgtacagcgtgagaggccgtgatgcagaggtggagctcaagtatgaattatatgcaatt
gtggaacacacagggttttcctctacttctggacattacttcagcttcgttcgctcgtct
cccgatacgtggcacagaatggatgactcaatggttactccagttagtgaagattatgtt
ctgtcaagggaggcttacattctgttatataagaggaagggaacttcatggttctcgagt
ttaatccaacaacgagatccttgcttgaattcatgttccgatactttgcatagtatcgat
actgttcgctcttcgttgtctgctgaatctatcgtcaattgtgaaactacgaatgtgcct
gtggatacgttgcggctgagtcctgctcagttttctgttgaaatgggggagcaagatact
ggtgccaatgatttgggaaatcctacctctgctaacttgcatatatttgagagtgcagca
ctcgagtcttctcccatcgtacctaagaacctctgctcgaacggcaacgatgaaggtatt
gatgggtttcgtcctctatcaccgacgagatctcccagccctgatatcgttttccaaact
ccagaaccacaataccaaatcccagtcagtcatctgaagaccgaaaagtgctcgacgtct
ggaaggccatcgaacaagggtgtggaagatcctgaaagaaaagcagccctgagatacatt
aagaaaagcatgccgggttcgagagggttgaaaatgatcaatgctatattgggacctcaa
aatgaaggtcccttaaacaagaagaagagactaaggtcattgccatgcaaaaggtcaagc
ccgccgaacaatcgtcgcaaaacgagtatagttttgtga
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