Cucurbita pepo subsp. pepo (vegetable marrow): 111810240
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Entry
111810240 CDS
T05351
Name
(RefSeq) peroxisome biogenesis protein 5-like
KO
K13342
peroxin-5
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111810240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpep04131
]
111810240
Membrane trafficking [BR:
cpep04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111810240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_11
TPR_17
TPR_CcmH_CycH
TPR_8
TPR_14
TPR_19
TPR_7
CFAP70_TPR_C
TPR_9
TPR_12
CFAP70_mid_TPR
TPR_20
RMD1-3
PPTA
NGF
Motif
Other DBs
NCBI-GeneID:
111810240
NCBI-ProteinID:
XP_023552656
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Position
LG14
Genome browser
AA seq
746 aa
AA seq
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MAMRELVTGGAACAVPGASSSSNPLGALANAIIGSSSKTQERLREIPTSQLTGPERPFAP
ASHGQLPGSEFDHPPLHPNEQASNFFSGFHSAADQSGLASAWNQVQGGPPPVHLRDMQPN
LAEFDRIYDQMPASQDQPVLDGPPQRILSNFLHSFVESSRGGIPFHPTSLPLLGLSEGDK
QCIRDRSSIMARHFFADKNEDFINAQVNALLSSLDIDNSRQVRGPQPGRFHELEDYWNES
QALQRPGGHIADGWASEYSLNREKYADHEAWAQSFEQQHGANGWASEFEKEKFQLASAEK
MAGGNMMNLAAMEQTHKLAKTLADNNDPKFQNSKFLQFVSKMSRGELIIEDNQVKPNSLS
PSDNWASEYQQQYNGGLPWSDEFVSNQTNRWADEFAEEKQHMSDDPWVNEFSKLHMQDDW
VEEFGQQVGEGASGEADNWANAYDEYLNEQVAAKGKTDASKGIYVFSDMNPYVGHPNPLK
EGQDLFHKGLLSEAVLALEAEVMKNPENSEGWRLLGIAHAENDDDQQAIAAMKRALDADP
TNLEVLLALGVSHTNELEQAAALRYLYGWLQHHPKYGMLAKPELSDSLYYADVAGLFNEA
AKMFPDDADVHIVLGVLYNLSREFDKAIASFETALKLKPQDYSLWNKLGATQANSIQSAD
AILAYQQALDLKPNYVRAWANMGISYANQGLYEESIKYYVRSLSMNPKADNAWQYLRISL
SCASRNDMLEACDSRNLDVLQKEFPL
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgagagcttgttactggaggagctgcttgtgctgttcctggtgcttcttct
tcttctaaccctctcggtgcccttgccaacgcaataattggctcctcatccaagacccag
gaaaggctacgggaaattcctacatcgcagctcacaggtccagaaaggccgtttgcccct
gcgagccatgggcagctccctggctctgaatttgatcacccaccgcttcatcccaatgag
caggcgtctaatttttttagcggcttccactcggctgccgatcagagtggtctggcctct
gcatggaatcaggttcagggcggtcctcctcctgttcatttgagagatatgcaaccaaat
cttgctgaatttgatcgaatttatgaccaaatgcctgcttctcaggatcaacccgtattg
gatgggccaccgcaaagaattctgtcgaactttttgcactcatttgtagagagtagccgt
ggtggaataccttttcatcctacctctctgcctttattgggactatctgaaggtgataaa
caatgtatacgagatcgtagtagcataatggctcgacatttttttgcagataagaatgaa
gacttcataaatgcacaggtgaatgcacttctatcttccttagacattgacaacagtaga
caggttagggggcctcagcctggtaggtttcatgagttggaggattattggaatgaatct
caagctctccagagacctggtggtcacattgcagatggatgggcctctgaatatagccta
aaccgggaaaagtatgctgatcatgaggcttgggctcagtctttcgaacaacaacatggt
gccaatggatgggcctctgagtttgagaaggagaagtttcagttagcatcggcagaaaaa
atggcaggtggtaatatgatgaacttagctgcaatggagcagactcacaagcttgcaaag
acgttagctgataataacgaccctaaatttcagaactcgaagtttcttcagtttgtttca
aagatgagtaggggtgaacttattattgaagataatcaagtcaagccaaactctttatct
ccatcagataactgggcttccgagtaccagcaacagtataatggaggtcttccctggtct
gatgaatttgtttctaatcaaactaatcggtgggctgatgagtttgctgaagagaagcaa
catatgtcagatgatccatgggtaaatgaattttccaagttgcacatgcaagacgactgg
gtggaagaatttggtcagcaggttggagaaggggcttctggagaagccgataattgggca
aatgcatatgatgagtatctaaatgaacaagtagctgccaagggaaagacagatgcttca
aagggaatatacgttttttctgatatgaacccatatgttggtcatcctaatcccttgaag
gaaggccaggatctgttccataaaggccttctgagtgaggcagtgctcgctttagaggct
gaagttatgaaaaaccctgaaaattctgaaggttggaggcttcttggaattgcacatgct
gaaaatgatgatgatcaacaggctattgctgccatgaagcgggcactggatgctgaccct
acaaacttagaggtgcttcttgcgcttggtgtgagtcacacaaatgaattagagcaagct
gctgctttaagatacttgtatgggtggttacagcatcacccgaagtatggaatgcttgca
aaaccggagctttctgattcgttgtactatgcagatgtagctggcttatttaacgaagct
gcaaaaatgttccctgatgatgctgatgtgcacatagtacttggtgtcctttataatttg
tccagagaatttgacaaagcaattgcatcctttgagacagccttgaaactaaagccgcaa
gattactctctttggaacaagctaggtgctacgcaagctaacagcattcaaagtgctgat
gccatattagcttatcaacaggcacttgatttgaagcctaattacgttcgtgcctgggcc
aatatgggaatcagttatgctaatcaggggctctatgaggaatcgattaagtactatgta
aggtcacttagtatgaatccaaaggcagacaatgcatggcaatacttaagaatttcacta
agctgtgcatcaaggaatgacatgctggaagcctgtgattcccgcaatctcgatgttctt
cagaaggagttcccattatga
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