Cucurbita pepo subsp. pepo (vegetable marrow): 111810244
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Entry
111810244 CDS
T05351
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111810244
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpep04040
]
111810244
Ion channels [BR:
cpep04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111810244
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Motif
Pfam:
cNMP_binding
Ion_trans
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
111810244
NCBI-ProteinID:
XP_023552664
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Position
LG14:4623139..4626832
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AA seq
648 aa
AA seq
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MATSSDEEVEKELQEHDGGFCRSLYGVGSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFL
YTLSISESWMCLFVDGWLAITLTVLRCTADAFHLWNMWLQLKTATRYSFAGGASTAATPE
NRGLRDSTPRAVALRYFKSKKGFFFDLFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLI
VFLFQYLPKLYHSVCLLRRLQNLSGFIFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQR
AAKCLKEQCRATSSCGVRVLSCKDRIFYGGKMGMGRDSARFDWASNRQPKFMCLDTADNF
NYGAYKWTVQLVVNQSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLL
VTMLIGNIKVFLHATTSKKQGMQLKMRNLEWWMRKRHLPQGFRQRVRNFERQRWAAMRGV
DECEMIKNLPEGLRREIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITR
EGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSC
TLVTLETTEAFGLEAEDVKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRY
RHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQDHFDF
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcctccgacgaagaagtagaaaaagaattacaagaacacgacggtggcttc
tgccggagcctctacggagtcggctcggttctcgacccgagagccaaatgggtccgagaa
tggaaccgggtcttcctcctcgtctccgccgcaggcctcttcgtggaccctctcttcctc
tacacgctctccataagcgagtcatggatgtgcttgtttgttgatgggtggttagccatc
accctcaccgtcctccgctgcaccgccgacgccttccacctttggaacatgtggctccag
ctcaaaactgccacaagatactccttcgccggtggagcttccaccgcagccacgccggag
aatagaggccttagagattccaccccacgcgccgtcgctctccgctacttcaaatccaaa
aaaggcttcttctttgatctcttcgttattcttccactcccacaggtggtattatgggta
gtaattccaagaataatgaaggaaggatcagtgacattggtgatgacagtattgttaata
gtatttctatttcaatacttaccgaaattgtaccattcggtttgcctgttgcggcgcctc
caaaacctgtcggggttcatctttggcacggtctggtggggcattgccctcaatctcatc
gcttactttgttgcggctcacgctgcaggtgcatgctggtacctgttgggtgtgcaaaga
gcagccaagtgccttaaagagcaatgcagagccacgagcagctgtggggtgagggtgttg
tcgtgcaaagatcgtatcttttatggaggaaagatgggaatggggagagacagtgcaaga
tttgattgggcgagtaacaggcaaccgaaattcatgtgtttggatactgctgacaacttt
aattatggagcttataagtggactgttcagcttgttgtcaaccaaagtcgcttggagaag
atcctttttcccatcttttggggtctcatgactcttagtacctttgggaacttggagagc
accacggaatggctggaagttgtgttcaatatcattgttctcaccagtggactcttattg
gtcaccatgttgataggaaacatcaaggtgtttctgcatgcaacaacgtcaaagaaacaa
ggaatgcagctaaagatgaggaatctagagtggtggatgagaaagcgacatcttccacaa
ggcttccgacagcgtgttcggaacttcgaacggcaacgttgggcagcaatgcgcggagtt
gacgagtgcgagatgataaaaaacctaccggaagggctccgacgagagataaagtatcac
ctttgcttggatctagttaggcaggtaccattgtttcaacacatggatgatcttgttctt
gagaacatttgtgaccgtgtcaagtccctcatcttcaccaagggcgaaaccataacaaga
gaaggcgacccagttcaaagaatgttgtttgtcgtccgagggcacctccaaagcagccaa
gtcttacgcgacggcgtgaaaagctgctgcatgttggggccaggcaacttcagcggcgac
gagcttctatcatggtgcctccgccgccccttcatagagcggcttccgccgtcctcttgc
actttggtgacacttgagacgacggaggcgtttgggttggaggcggaggatgtcaagtac
gtaacccagcactttcgctacacattcgtcaacgacaaggtcaaacgtagcgcccgctac
tactcccctggctggcgtacttgggctgccgttgccatccagctcgcctggcgtcgttac
cgccaccgccttacgttaacatcattgtcgtttattcggcctcggcgtcccctgtcgcgg
tgctcttccttgggggaggatcgcctccgcctctacaccgcgttgcttacttctcccaag
cccaatcaagatcacttcgatttttga
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