Cucurbita pepo subsp. pepo (vegetable marrow): 111810454
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Entry
111810454 CDS
T05351
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Module
cpep_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111810454
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
111810454
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
111810454
NCBI-ProteinID:
XP_023552930
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Position
LG14:5812390..5814773
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AA seq
388 aa
AA seq
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MGLNSSPIECLVFIAILLCITKCYAQNVFNIMQFGARNDGRTDSTQALSKAWSEACSHDG
GGVVLVPDGRFLIFSLVLKGPCKGSIGLRINGELLAPIDPNFAIGQIWLSIYEVDNLFVD
GYGSLNGRGSLAWSIKKFNRPISMKLSKINHARITGITSYNSKNFHFSVHGCNDVTFDHI
RTMAPKDSPNTDGIHISKSSGINIMHSRFDTGDDCISLGPGSRFINITNIYCGPGHGISI
GSLGKYPNEEDVSDVIVRDSTFVGTDNGVRIKTWSSSLPSSVTKITFLNLEMKDVKNPIV
IDQNYCLDCQRDQMSNSRVKIRDVRYENIRGTSATQVAVNFECSHVLPCEDIVLGNINLP
FKGAGQPTSICNNVKGHAFGKQFPNSCL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaattcatcacctattgaatgtttggtgttcattgccattttactttgcatt
actaaatgctatgcccaaaatgtgttcaatatcatgcaatttggtgcaagaaatgatgga
cgaacggatagcactcaggcattaagtaaggcatggagcgaagcttgttcgcatgatgga
ggtggtgtagttttagtaccagatgggaggtttctaattttttcgttggtgcttaaaggt
ccatgcaaaggatccattggtctacgaattaatggcgaattgttggctcctatcgatcca
aattttgccattggccaaatctggctgagtatctatgaagtcgacaacttatttgtcgac
ggttatggcagcttgaacggtcgcggttctttagcttggtctatcaaaaagtttaaccgt
ccaatttctatgaaactctctaaaatcaaccatgcgagaattacgggtataacatcgtac
aatagcaaaaacttccattttagtgtgcatggatgtaatgatgtcacgtttgatcacatt
agaacaatggctccaaaagatagccccaacacagatggaatccacatttccaagtcaagt
ggtatcaacattatgcattcaagattcgacacgggagacgattgtatctctttgggccct
ggaagtagattcatcaacataacaaacatctattgtggtccaggtcacggaatcagcatc
ggcagccttggaaaatacccaaatgaggaagatgtctctgatgttatagtaagagactct
acatttgttggtacagacaacggtgtgaggatcaaaacatggtcgtcttcacttcctagt
tctgttaccaagatcacttttctcaatctcgaaatgaaggacgtaaaaaaccctatcgtc
attgatcaaaattattgccttgactgccagagagatcaaatgagtaactcaagagtgaag
attcgagacgtgagatatgaaaatatacgggggacttcagcaacccaagtggccgtaaat
tttgaatgcagccacgttttaccatgcgaagacatagtgttgggtaacattaacctcccc
ttcaagggtgctggccaaccaacttctatttgtaataatgtgaagggccatgcttttggc
aaacaatttccaaactcttgcctttaa
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