Cucurbita pepo subsp. pepo (vegetable marrow): 111810521
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Entry
111810521 CDS
T05351
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111810521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpep04121
]
111810521
Enzymes [BR:
cpep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111810521
Ubiquitin system [BR:
cpep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111810521
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
ZnF_RZ-type
FAIM1
Motif
Other DBs
NCBI-GeneID:
111810521
NCBI-ProteinID:
XP_023552998
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All DBs
Position
LG01:16382651..16385587
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AA seq
337 aa
AA seq
DB search
MASGNPCFDDVRSKPEVIDPPQNQDMMDIREAVDGPTQNELKPNVAVSSSVRQLLECPVC
LNAMYPPIHQCSNGHTLCSDCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSY
GCIGIYPYYSKVKHESQCIYRPYSCPYAGSECLVVGDIPYLVAHLKDDHKVDMHSGSTFN
HRYVKSNPQEVENATWMLTVFSCFGHYFCLHFEAFQLGMAPAYIAFLRFMGDDDDAKNYS
YSLEVGGNGRKIVWQGVPRSIRDSHRKVRDSFDGLIIQCNMALFFSGGDRKELKLRVTGR
IWKEQETGRTAYDETFSSNPIFLSSSRFPFCRVNEAF
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggaaatccttgttttgatgatgtgcggagcaaaccagaggttattgatcct
ccacaaaatcaagatatgatggacatcagggaagctgtggatggtccaactcaaaatgaa
cttaaacctaatgttgctgtttccagcagtgttcgccagcttttggaatgcccagtgtgt
ttgaatgcaatgtaccctccaatacatcagtgttcaaatggtcacacactgtgttcggat
tgcaagcctagggtgcacaatcggtgccctacgtgcaggcacgaacttggcaatattcga
tgccttgcattggagaaggtggctgcatcgctagaacttccatgtaaatatcagagctat
ggttgcattggcatatatccttattacagcaaggtcaaacatgaatcccaatgtatttac
agaccttatagttgtccatacgctggatcagaatgtttggtcgttggtgatataccctat
ttggtggcccatctcaaagatgatcataaagtagacatgcacagtggaagcacattcaac
catcgatacgtaaaatcaaaccctcaagaagtcgaaaacgcaacgtggatgctaacggtt
ttcagttgctttggtcattacttttgcctgcatttcgaagctttccagctcggaatggct
ccagcatacatagcattcttgcggttcatgggcgatgacgacgatgcaaagaactacagc
tatagtctcgaagtgggtggaaatgggaggaagatagtatggcaaggggtgcccagaagc
atcagggacagccatcgaaaagttcgggatagtttcgacgggctcattatccaatgtaac
atggctctcttcttctctggtggagaccgtaaggaactgaagcttagggtgactggtaga
atttggaaagaacaggagactgggagaacagcttatgatgaaactttcagttcaaatcct
atcttcttgtccagtagtcggtttcctttttgtagagtaaatgaggctttctaa
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