Cucurbita pepo subsp. pepo (vegetable marrow): 111810793
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Entry
111810793 CDS
T05351
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111810793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111810793
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111810793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
111810793
NCBI-ProteinID:
XP_023553352
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Position
LG14:complement(6012013..6014688)
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AA seq
470 aa
AA seq
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MIHCLVIEKMESDLGKLFIGGISWDTDEERLRDYFGNYGEVVEAVIMRDRTTGRARGFGF
VVFADPVVAERVILEKHIIDGRTVEAKKAVPKDDQNMLNRNIGSSIQGSPSSGRTKKIFV
GGLASTVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEVVDRVLHKTFHE
LNGKMVEVKRAIPKEQTPGPNRSPLVGYNFGMSRATGFLNNYTQGYNMSPLGGIGIRSDG
RLSPFLSPRTGVPPLGLNFEQGLRQGYGRTMNIMNSQAQEQMLSSYYNANSNRYIAPIGY
SGGNGRGDSPLSSSTWNVWGNGSISTASMNSSASGMGNFRVAYGNNDDNWNLPAVANHVG
VGNVPDNGYAVRDNGVGFRGDYGGNVVSIATRKPFAETTNGFERSYRELYRDQVVHDDVT
WQSTAPELDDSMAFGYGLGNLASDDPTKNSESSLANYDISSRQSTRGIAA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgattcattgtttggtaatagaaaagatggaatcagatcttggcaaactctttattggc
ggaatttcttgggatactgatgaagaacgtcttagggattattttggaaactatggcgaa
gtggttgaagctgtgatcatgagagatcgcaccactggtcgtgctcgtggctttggcttt
gttgtctttgcagatcctgttgttgctgagagagtcattttggagaagcatatcatcgat
ggccgcactgttgaagctaaaaaggctgttccaaaggatgatcagaacatgttgaataga
aacattggcagtagcattcaaggttctcctagctcgggacgaacgaaaaagattttcgtt
ggaggtttagcttcaacagtcacagaggcagactttcagaagtactttgatcagtttggc
acaatcactgatgttgttgttatgtatgatcacagcacgcaaaggccgagaggttttggc
ttcattacgtacgactcggaggaggtcgtcgaccgtgtgctgcataaaacctttcatgaa
ctcaatggaaaaatggttgaggttaaaagagcaatcccaaaagagcaaaccccagggcct
aaccggagccctcttgtaggatataactttggtatgagtagagctactggatttcttaac
aactatactcaaggctataatatgagtcctctcggaggtatcggaatccggtccgatggt
aggttgagtccgtttcttagccctcgaaccggggttcctcctttaggtttgaattttgag
caagggctgaggcaaggctatggtaggactatgaacattatgaatagtcaagcacaggaa
caaatgttgagttcctattataatgccaattcgaataggtacattgccccgattggctat
agcggaggcaatggacgaggcgattctccgttaagctcgagtacgtggaatgtctgggga
aatggaagtataagcactgcttccatgaactcttctgcctctggaatgggtaacttcaga
gtggcatatggaaataacgatgataattggaatttgcctgctgttgctaatcatgttgga
gtagggaatgttcctgataatggatatgcagttcgagacaatggcgtcgggttcagagga
gactatggaggaaatgtagtctcgatcgcaacccgaaagccatttgctgaaacaaccaat
ggttttgagaggtcatacagggaattatatcgtgatcaagtcgtgcacgatgatgtaact
tggcagtctaccgctcctgaacttgatgattctatggcttttggttatggtcttggtaac
ctcgcttcagacgatccaacgaaaaattcagagagttctctagcaaattacgacatttcg
agccgacaatcaactagaggaattgctgcgtag
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