KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111810865
Entry
111810865         CDS       T05351                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111810865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111810865
   03041 Spliceosome [BR:cpep03041]
    111810865
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111810865
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111810865
Spliceosome [BR:cpep03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111810865
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 111810865
NCBI-ProteinID: XP_023553445
LinkDB
Position
LG14:complement(2163298..2171469)
AA seq 435 aa
MDVTKKRRMDENGVDSSDHSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHVDVLDAVR
CIADRDVSQRKLFIRGLSCDTSTEGLRSLFSAYGELEEAVVIIDKVTGKSKGYGFVTFKH
VDGSILALKEPSKTIDGRVTVTQLAAVGVSGQSSNAADLSLRKIYVANVPMDMPADKLLA
HFSLYGEIEEGPLGFDKQTGKCRGYALFVYKKAEGAQAALVDPIKTIDGRQLSCKYANDG
KKGKPGGGTDGIQTTGAGQGNLHGDGMPMAPPSAIPGSGGQYGGPGGMGSYGGFSGGPQG
AQPLGHHPLNSSMGPGISSVGSQALSSQGSSGGYGGGPYGGGYGGPGSSIYGGMGSVGGG
LGSSGGGLGGAGGVSSLYRLSQSSVGMPSGGYPDSGHYSMSSASGHPNHHHQQAGASPAP
RVPPGGLYPNMPPYY
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggacgtcaccaagaagcggaggatggacgaaaatggcgtcgactcctccgaccattct
ttctctagaattactcctgaagacgctcgcaagatcattgatcgtttcactccggaccag
cttatcgatattttacaagatgcagtttcgcgtcacgtggatgttcttgatgcagtacgg
tgtattgcagaccgagatgtctcccagcggaagctgtttattcggggtcttagttgcgat
actagtacagaaggtttgcgttctctcttttccgcttatggcgagcttgaagaagctgtt
gttattattgacaaggtgactgggaaatcgaaaggttatggctttgtgacttttaagcat
gttgatggttctatactggctttgaaggaaccgagcaagacaattgatggccgcgttacg
gtgacgcaattggctgcagtgggagtttctgggcagagttcgaacgctgcagacttgtcg
ttgaggaaaatttatgtggcgaatgttccaatggatatgccggccgataaactgttggca
cacttttcgctgtatggagaaattgaggagggaccgctaggcttcgataagcagacgggt
aagtgtagaggctatgctttgtttgtgtacaaaaaggcagagggtgctcaagcagctctg
gttgatccaatcaagacgattgatggaaggcagttgagttgtaaatacgctaacgatggg
aagaaagggaaacctggcggtgggacggatggaattcaaacgacgggagcgggtcaagga
aacttgcatggagatggtatgcctatggctcctccatcagcaatccccggttcgggcgga
cagtatggtggtccgggtggcatgggatcgtatggaggcttttctggtggccctcaaggg
gcgcagccacttggtcaccatccgctcaactcttcaatggggccaggaatatcctctgtc
ggtagtcaggctctatcttcgcagggcagctccggcggatatggtggcggtccatatggt
ggtgggtacggcgggcccggttcctcaatatatggtggtatgggaagtgtaggtgggggc
ttgggtagttctggaggtggattgggcggagctgggggtgtttcatcactgtataggtta
tctcagagttcggttggaatgccttctggtggttatccggatagtgggcattatagcatg
tcatcagcatccgggcacccaaatcaccaccatcaacaggcaggagcatcaccagcacca
cgtgttccacctggaggattgtatcccaatatgccaccatattactga

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