Cucurbita pepo subsp. pepo (vegetable marrow): 111810892
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Entry
111810892 CDS
T05351
Name
(RefSeq) ATP-dependent DNA helicase DDM1
KO
K19001
ATP-dependent DNA helicase
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpep03036
]
111810892
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111810892
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
DBINO
Motif
Other DBs
NCBI-GeneID:
111810892
NCBI-ProteinID:
XP_023553491
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Position
LG14:3543878..3551117
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AA seq
757 aa
AA seq
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MALEEKPRADNSAESPTSVLEDEDICNGENEIKLEEKIILEAKNGDSSLISKEMAEEEQK
LLEARVKDEEAEKLEDSKESAKLNDNQFTKLDELLTQTQLYSEFLLEKMDDITFNGVEEE
NKSVEKSNVRGSKRKAAPRYNNRKAKRAVAAMLTRSKEGERDEDENLTEEERIEKEQSEL
VPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPY
LVIAPLSTLSNWINEISRFVPTVNAIIYHGNKKQREEIRRKSMPKTIGPNFPIVVTSYEI
AMSDAKKVLRHYNWKYLVVDEGHRLKNSKCKLLKELKYITVENKLLLTGTPLQNNLAELW
SLLNFILPDIFSSNEEFESWFDLSGKSHAEEQEETQENRKAQVVAKLHAILRPFLLRRMK
SDVELMLPRKKEIILYATMTECQKNFQEHLINKTLESHLSEKGSGHVLKGKLNNLMVQLR
KNCNHPDLLESVFDESYTYPPVEQIVEQCGKFRLLDRLLTRLLARKHKVLIFSQWTKILD
IMDYYFSEKGFEVCRIDGNVKLDERKRQIQEFNDVNSNYRIFILSTRAGGLGINLTAADT
CILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILNRAFSKLKLEHVVIE
KGQFHQERTKPNSGAIIEEEDLLALLRKEDSAEDKMIQTDISDADLERILDRSDLLPPSG
SDDEKSKVSGDLYPLKGPGWEVVIPTSTGGVLSTLNA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgaggagaaaccaagagctgataattctgcagagtcaccgacctcggttctg
gaagacgaggatatatgtaatggggaaaatgagatcaagttggaggaaaagataattttg
gaagcaaaaaatggggattccagtcttatatcaaaagaaatggcagaggaggaacagaaa
ttgctggaagctcgggttaaggatgaggaggccgagaaacttgaggattcaaaagaatct
gcaaagttgaatgacaatcagtttaccaaattggacgaacttctcactcaaacacagttg
tactcagaatttttgctggagaaaatggatgacatcacatttaatggagtggaggaagag
aataaatctgttgagaaaagtaatgttcgtggttcaaagaggaaagctgctccacgttat
aataataggaaggcaaaaagagctgttgcagctatgctgactagatcaaaagaaggtgag
cgtgacgaagatgagaacttgaccgaggaagaaagaatcgagaaggagcagagtgaactt
gtacctctgttgactggtggcaaattgaagtcctaccaactcaaaggtgtcaaatggtta
atctcattatggcagaatgggctgaatggaatccttgcagatcaaatggggcttggtaag
acaattcaaaccattggcttccttgcacatctgaaagggaagggactggatggaccttac
ttagtaattgctcctctttccacactttcaaattggataaatgaaatatcgagatttgtg
cccacagtgaatgctattatttatcatggtaacaaaaaacaaagggaagagattcgaaga
aagtccatgcctaaaacaattggacctaacttccccatagtggttacttcttatgagatt
gcaatgagtgatgctaaaaaagttttgaggcattacaattggaaatatcttgtcgttgat
gaggggcataggctgaaaaactcaaaatgcaaattgctgaaggaattgaagtacataact
gttgaaaataaactgcttcttactgggacaccactgcagaataatttggctgagctttgg
tcgttgttgaactttattttaccagatattttttcgtccaatgaagaatttgagtcatgg
tttgatctctctggaaagagtcatgctgaagaacaagaagaaacacaagagaatagaaag
gcccaggtggtagcaaaactgcatgcaatactgagaccatttctacttcggagaatgaaa
tccgatgttgagctaatgctccctcggaagaaagaaattatattgtatgcaaccatgacc
gagtgtcagaagaactttcaggaacatttaattaacaagacgttggaaagtcatctctcc
gagaagggatcaggccatgttttgaaaggaaagcttaataatttgatggtccagcttcgg
aaaaattgcaaccatcctgacctcctggaatcagtttttgatgaatcatatacatatcct
cctgtagagcagatagtagagcagtgtggcaaatttcgcttactggatagattgttgaca
cgactgttagcacgcaagcataaagtccttatcttctctcaatggactaagattttggat
atcatggactactattttagtgagaagggatttgaagtttgcagaatagatggtaatgtg
aaactagatgaaaggaaaagacagatccaggagttcaatgatgttaacagcaactacagg
atattcattctaagcacccgagctggtggtctgggtatcaaccttactgcagcagatacc
tgtatactctatgacagcgattggaacccacaaatggatttgcaggccatggatagatgt
cacaggattggtcaaacaaaacccgtacacgtttacagacttgcaacagctcagtctgta
gagggccgcattctgaatagggcatttagtaagttgaagcttgagcatgttgtcatcgag
aaggggcaatttcatcaggaacgaactaaacccaactctggagctattatagaggaagag
gatctgctggcactactaaggaaggaagattctgctgaagataagatgatacaaacagac
attagcgatgctgatttggagcgtattttagaccgctccgacctgcttcccccgtctggt
tcagacgacgagaaatcgaaagtttctggtgatttataccccctcaaagggcctggttgg
gaggtggtgataccaacttcaacaggaggggtactctctacactcaacgcttaa
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