Cucurbita pepo subsp. pepo (vegetable marrow): 111811277
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Entry
111811277 CDS
T05351
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04145
Phagosome
cpep04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111811277
09142 Cell motility
04814 Motor proteins
111811277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111811277
03036 Chromosome and associated proteins [BR:
cpep03036
]
111811277
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpep04812
]
111811277
04147 Exosome [BR:
cpep04147
]
111811277
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111811277
Chromosome and associated proteins [BR:
cpep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
111811277
Cytoskeleton proteins [BR:
cpep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
111811277
Exosome [BR:
cpep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111811277
Exosomal proteins of other body fluids (saliva and urine)
111811277
Exosomal proteins of colorectal cancer cells
111811277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
111811277
NCBI-ProteinID:
XP_023553814
LinkDB
All DBs
Position
LG15:complement(5434979..5437625)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDTTVGGGDDAFNTFFSETGAGK
HVPRALFVDLEPTVIDEVRTGMYRQLFHPEQLISGKEDAANNFARGHYTIGKEIADLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLAIERPTYTNLNRLISQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITSSAFEPSS
MMAKCDPRNGKYMACCLMYRGDVVPKDANAAVATIKTKRTIQFVDWCPTGFKCGINYQAP
TVVPGGDLARVQRAICMISNSTSVAEVFCRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESDEGGDDDDQEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtgcatttcgattcacatcggtcaggctgggattcaggtcggcaatgcgtgc
tgggaactctactgccttgaacatggaattcagcctgatggccaaatgccgggtgacacg
actgtaggcggaggcgatgatgccttcaacaccttcttcagtgaaacaggtgcaggcaag
catgttcctcgagctcttttcgttgatctcgagcctactgtcatcgatgaggtgaggact
ggaatgtatcgccagttgttccatcctgaacagctaatcagcggtaaggaagatgctgcc
aacaactttgctcgcggccactacaccattggcaaggagatcgctgatctctgtttggat
cgcattagaaagctcgctgacaattgcactggactccaaggcttccttgtttttaacgct
gtcggtgggggtactgggtctggtcttggctctctcctgttggagcgtttgtctgttgac
tatggcaagaaatcaaagcttggtttcacagtttatccctctccacaagtttccacctct
gttgttgaaccctacaacagtgttctctcaacccactctctccttgaacatacagatgtt
tctgtgctccttgacaacgaagccatttatgacatttgtagacgttcccttgcaattgag
cgacccacctacacaaacctcaaccgcctcatctctcaggtgatttcatccctgacagca
tctctacggttcgatggagctttgaatgtggatgtaaccgagttccaaacgaatttggtc
ccatacccaagaatccacttcatgctttcctcctatgctccagtgatctccgcagagaag
gcataccacgaacaactctctgtagcggagatcaccagcagcgccttcgagccatcttcc
atgatggccaagtgcgatccccgcaatgggaagtacatggcttgctgtctgatgtacaga
ggagatgttgtgccaaaggacgccaacgccgccgttgccaccataaaaacgaagcgcacg
atccagttcgtggactggtgccccactggtttcaagtgcgggatcaactaccaggcgccg
acggtggttccgggtggcgacctggccagagtgcagagggcaatctgtatgatatcgaac
tccaccagcgtggcagaggtgttctgtcgcatagaccacaagtttgatctgatgtatgcg
aagagggcgttcgtgcattggtacgtgggggagggcatggaggagggagagttctctgaa
gctcgtgaggatcttgcggcccttgagaaggattatgaggaagtgggtgctgagtctgat
gaaggtggtgatgatgacgatcaggaggagtactga
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