KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111811383
Entry
111811383         CDS       T05351                                 
Name
(RefSeq) protein decapping 5-like isoform X1
  KO
K18749  protein LSM14
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpep03019]
    111811383
Messenger RNA biogenesis [BR:cpep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111811383
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 111811383
NCBI-ProteinID: XP_023554004
LinkDB
Position
LG01:complement(12971850..12977931)
AA seq 602 aa
MASDAGSKATSAADSYLGSFITLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKK
DGPQVPPSDKFFEYILFRGSDIKDLQVKCSPPVQPTAPINNDPAIIQSHYPASVSPSTSM
HSVASGSLPDHTSHTAFGFPPSNFQGGLPPYQPGGNLGSWGASPPPPPSSDGSGLAMPLY
WQGYYGPPNGLPQLHQQSIIRPPGLSIPSSMQQSMQYLDINASLPIGSSKQPEAPSPLPP
ASNSSPNLTSTALPPPTFSTALPTFPFVSISETIPSSVANKTNVATLPGAPVSVSLPVGP
ILSSFSTSSADVSSAIPPITNEPNAVSGPSLQYQSASQSTSSVVGISNSRTESSIPSLVT
PGQLLQSAPTAVVPSQSSHTVHKDVEVVQSSSLKPSMPVTTETQPPILPLPVQSRPVQKS
NGAHFQARHFYRGRERGRGSGKSSRPVTKFTEDFDFIAMNEKFNKDEVWGSLGKGSKSYL
KDKDVDGTVSDEDDTREEDEGELSQAGIKPLYNKDDFFDSLSYNAMDNDPQNGRTRYSEQ
VKIDTETFGHFSRYRGGRGGRGPGRGGYFRGGYHGRGYGYNGRGWGRGRGRGRGRGRSFN
HT
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggcttcagatgctggttcgaaggcgacttctgctgccgattcctaccttggaagcttc
ataactttgacttccaagagtgaaattagatacgaaggcgttctgtacaacatcaacacg
gaagagtcgagtattggactgagaaacgtgagatcctttggaacagaaggaagaaagaag
gatggtccccaagtccctccaagcgataaattttttgagtacatcttattccgtgggagt
gatatcaaggatttgcaggttaaatgttctccacctgttcagccgacagcacctataaat
aatgatccagcaattattcaatctcactaccccgcctcagtttccccatctaccagcatg
cattctgttgccagtgggtcattacctgatcatacttcccacacggcatttggattccct
ccgtctaattttcaaggtggtttgcctccgtatcaacctggaggcaacttggggtcatgg
ggagcttctcctccgcctcctcctagttcagatggcagtggacttgccatgcccttgtat
tggcaagggtattatggcccaccaaatgggcttcctcagttacaccagcagtcgataata
cgtcctcctggtctatcaataccttcatccatgcaacagtcaatgcagtatctggacatt
aatgcatctttacccattggatcttcaaaacaaccagaagctccgtctcccttgccccct
gctagtaatagttctcctaacttgacctccactgctctgcctcctccaactttttcaaca
gctttgccaacgttcccctttgtttctatttctgaaacgataccaagttcagttgctaat
aagacaaatgttgctacccttcccggagcccctgtcagtgttagtttgccagtaggtccg
atactgtcttcattttctacttcaagtgcggatgtcagttctgccataccaccaatcact
aatgaacccaatgcagtttctggtccttcattacagtatcaaagtgcgtcccagtcaact
tcatctgtagttggaatatctaactctcgcacagaatcttctataccttctctagttacc
cctgggcaactattgcagtctgcgcccactgctgtggttccatcccaatcttcacataca
gtgcataaggatgtggaagtggtccagtcatcatcattaaaaccttctatgccagtgaca
acagagactcagccaccaatattaccactacctgtacagtcaaggcctgtccagaagtca
aatggtgctcattttcaggctcggcatttttaccgaggacgtgaaagaggaagaggctct
gggaagagttcccgtcctgtgaccaaatttacagaagattttgatttcatagcaatgaac
gagaaattcaacaaggatgaagtttggggaagtctaggtaaagggagtaaatcttatctc
aaggataaggatgtggatggaacggttagtgatgaggatgacactcgggaagaagacgag
ggtgaactctcacaggctgggatcaagcccttgtataacaaggatgacttctttgattca
ctctcttataacgctatggataatgatcctcaaaatggtcggactagatattcagagcaa
gtaaagatagacacagagacttttggccacttttcgaggtatcgggggggccgaggtggc
cgaggtcctggacgtggagggtatttccgtggaggttaccatggaagaggatatggctat
aatggcaggggttgggggcggggacgggggcgagggcgagggcgggggcgatcatttaat
catacgtag

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