Cucurbita pepo subsp. pepo (vegetable marrow): 111811559
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Entry
111811559 CDS
T05351
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111811559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111811559
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111811559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
111811559
NCBI-ProteinID:
XP_023554233
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Position
LG15:complement(734865..738217)
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AA seq
435 aa
AA seq
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MDSDEGKLFIGGIAWDTSEEKLRDYFSHFGEVNQAVIMRDKTTGRPRGFGFVVFSDPSVL
DQVLQDKHTIDGRQVEAKRALSREEQQTSSRSGIYNSGRSSGGSGYFRTKKIFVGGLPSA
LTEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLV
EVKRALPKDANPGSGGRGGYQNYGASGTNANNFDGRSDGNRYMQPQSTAGGFPPYAGYSV
SSYGYGGPNSGVPYGSYGSYGVGMYGGANTGFGGPAGPFGNPSAVNAGYLSGAPGAMKSS
WPNQAPGYGGPGYGASPGFGAGAPWSASGTSGPPAPRGQSPSGASGYGNQGYYGGNDGTY
GGYGTSGGRAASGPNSNVGSGQSGESHGMTGGYMGSGYGETNGNSGYSSGGWRSDASQTP
GGYGGGYGGTQSRHG
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggactccgacgaggggaagcttttcatcggaggaatagcttgggacacctccgaggag
aagctcagagactatttctcccactttggcgaagttaaccaagctgttattatgcgcgac
aagaccactggccgtccccgtggcttcggctttgtcgtcttctctgatccttccgttctt
gatcaggttcttcaggataaacacaccatcgatggccgccaggtggaggcgaaaagggcg
ttatcaagagaagaacaacaaacttcctcaagaagtgggatttataactctggcagaagt
tctggaggtagtggatattttaggaccaagaaaatatttgttggaggtctcccttccgca
ctaacagaagatgggtttcggcagtattttgaaagttatggtcaagtaactgatgtagtg
ataatgtatgaccaaaatactcaaagacctcgtggatttggtttcataacatttgacaat
gaagatgcagttgatagagtactttataagagctttcacgaactgaatggtaaacttgta
gaggtgaaacgagcacttcctaaagatgcaaatccaggaagtggtggtcgtggaggctat
caaaattatggtgcctctggcaccaatgctaacaacttcgatggtagatcagatggcaat
agatatatgcaacctcagtctactgctggtggtttccccccatatgctggatatagtgta
tctagttatggttatggaggtccaaatagcggtgttccttatggaagttatggtagttac
ggtgttggtatgtatggtggtgctaatactggatttggtggtccagctgggccatttgga
aatcctagtgctgtcaatgctggttatctaagtggagcaccgggagccatgaaaagttct
tggcccaaccaagctcccggatatggtggtcctggctatggtgccagtccaggctttggc
gctggagctccttggagtgcttcaggtactagtggacctcctgccccaaggggtcaatct
cctagcggggcttctgggtacgggaatcagggttattatggtggaaatgatggtacttac
ggtggatatggaacctctggtggacgagctgcaagcggtccaaatagcaacgttggttct
ggtcaaagtggagagtcacatggcatgactggtggatacatggggagtggctatggggaa
actaatggaaattcaggttattctagtggtggctggagatctgatgcttcacagactcct
ggtggttatggtggtggatatggtggcactcagtccagacatggttaa
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