Cucurbita pepo subsp. pepo (vegetable marrow): 111811719
Help
Entry
111811719 CDS
T05351
Name
(RefSeq) exopolygalacturonase clone GBGA483-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Module
cpep_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111811719
Enzymes [BR:
cpep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
111811719
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
DUF5605
NosD
Motif
Other DBs
NCBI-GeneID:
111811719
NCBI-ProteinID:
XP_023554502
LinkDB
All DBs
Position
LG15:7528424..7530092
Genome browser
AA seq
402 aa
AA seq
DB search
MSSLTISRSSTFIIFFSLCLITNGLAADFHVKRYGAKANGNSDDSQAIMKAWKDACMSRK
PSKVVISGGRYVVNSMKFKGPCMAPVHIQMEGRLEAPLNIQHMKSDDNWIIFEYINGLTI
SGKGIFDGRGSLAWKQNQCASSGKCDSLPISLRFYSLNNTIIRGITSTDSKFFHMNVHNC
RNMTIQNIIVNAPGISPNTDGIHIGGSSGVTISNARIETGDDCVSIGDGSQQIIVEKVTC
GPGHGISIGSLGKYKNEKPVSGIIVRNCTIKNTMFGVRIKTWPDSTPGIATNMHFNSIVM
KNVGTPILIDQQYCPYGKCRFKIPSRVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNV
KLSNINLRYIGTNGTAISECSNVKPTISGRVMPPACTRAFAI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcactaaccatttcaagatcatccacattcatcatcttcttctctctttgtctc
atcaccaatggcctagctgctgatttccatgtcaaaagatatggagcaaaagccaatggc
aactcggatgatagccaggcgattatgaaggcttggaaggatgcttgcatgtcaagaaag
ccaagcaaagtagtgatatcaggtgggagatatgtggtgaattcgatgaagtttaaaggg
ccatgcatggcgcccgttcatattcaaatggagggtagactcgaagcgcccctcaatatt
caacacatgaaatctgacgacaattggatcatttttgagtatattaatggtttaacaatc
tctggaaaaggcatttttgatggccgaggatctcttgcttggaagcaaaatcaatgtgct
tcttcgggcaaatgcgactctctccctattagcttgagattctacagcctcaacaacact
ataattcgaggcataacttcaacagacagcaagttcttccacatgaacgtgcacaactgc
aggaacatgaccattcaaaacatcatcgtcaacgcccccggcataagtcccaacaccgac
gggatccatattggaggatcgagcggggtgactataagcaatgccaggatcgaaactggt
gacgattgtgtctcgatcggcgacggaagccaacagataatcgtcgagaaggtgacatgt
ggtccgggtcacgggattagcattggaagcctcggaaagtacaagaatgagaaaccagtg
tctggaatcattgtcagaaattgcacaatcaaaaacaccatgttcggagttaggatcaaa
acatggccagattctactccaggaattgccaccaatatgcactttaatagcattgtgatg
aaaaatgttggcactcctatcctaattgaccaacaatattgcccatacggaaagtgccga
ttcaagattccatcgagagttgcaataagcgatgttggattcaggaacatcgtagggaca
tcgacaactcgagtggctgtaaagcttgtgtgcagccgagggtatccgtgcaagaacgtg
aagctatcaaacataaacttgagatacataggcaccaatgggacagccatatcagaatgt
tccaatgtgaagcctacaatatctggaagagtgatgccgccagcctgcactagggctttt
gcaatatga
DBGET
integrated database retrieval system
