Cucurbita pepo subsp. pepo (vegetable marrow): 111811881
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Entry
111811881 CDS
T05351
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpep03041
]
111811881
Spliceosome [BR:
cpep03041
]
Common components
Common spliceosomal components
General mRNP proteins
111811881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
111811881
NCBI-ProteinID:
XP_023554691
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All DBs
Position
LG15:complement(6754012..6765162)
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AA seq
595 aa
AA seq
DB search
MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKTDGKDDGEHRSKRS
KSEDESLDHDRHRDRTSSRHRSRSRDRDRDRHSSGKEFRGKEDREKNQEERSSKDRDVDR
DKERVHDHDRRGRDGEKDRERERSHRSRSHSERHRSDRDESIRQRTRDNEFREREKERES
RERGRDGRRHKEKKEDGTEPEADPERDQRTVFAYQISLKATERDVFEFFSRAGKVRDVRL
IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQAQSTSAAAGP
GGVMGPYTGGARRLYVGNLHPNITEDNLRQVFGAFGIVELVQMPLDESGHCKGFGFIQFS
RLEDARNALSLNGQLEIAGRMIKVSTVTDQPGLQDIGASTGDLDDEDGVGLSLNASSRAS
LMQKLDRTGTASSIAGSLGTHVVNNTGATMAMAPILGVGTIPSLGVATSLVSVPAFPGLG
AAGVQVPTVAANLLGVGTPSECLLLKNMFDPTAELEPTFDMDIRDDVEEECSRFGKLKHI
YVDKNSAGFVYLRFANSEAAMDAQRALNGRWFAGKMIGATFMDIPSYEAKFPDSR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggattttgacgagtatgattatttagagaaaacagttgaaaatcccgagggacagaaa
gtgaaggaaactgccaatggcggtgatgcagaaatgaagtctggagacaaacatcgtagt
cgaagttcaaagtataagactgatggtaaagatgatggggaacataggtcaaagcgttca
aaatcagaagatgagtcacttgatcatgatcgacatagagataggacttcttcccggcac
cggtctaggtccagagatagagaccgtgatcggcacagtagcggtaaggagtttagggga
aaagaggacagagaaaagaatcaggaagagaggagcagtaaggacagagatgtggacaga
gataaagaacgtgtgcacgatcatgatagacgaggcagagatggtgaaaaggacagggaa
agagaacggtcacatcgaagtagaagtcattcagaaagacatcgcagtgatcgagatgaa
agcattagacagaggacccgagataatgaattcagagaacgagaaaaagagagagagtct
agagagcgaggcagggatggcagaagacataaggagaaaaaggaagacggaacggaacca
gaagctgatcctgaaagggatcagaggactgtatttgcctatcagataagcttgaaggca
actgaaagagatgtgttcgaattcttctccagggccggtaaggtgcgagatgtacgcctc
atcatggatcgtaattcaagacgttctaaaggcgttgggtatgttgaatttgtggatgca
atgtctgtgcccatggctatagcactttccggccagctcctgctaagtcaacctgtaatg
gtaaagccatctgaagctgagaagaaccaagctcaatcaacttctgctgctgctggacca
ggtggagtaatgggtccctacactggtggtgccagaaggttatatgttggcaatctgcac
cccaacataacagaagataaccttcgtcaggtttttggagcttttggcattgtggaactg
gttcagatgccccttgatgaatctgggcattgcaagggttttggttttattcagttctca
cgtcttgaagatgctagaaatgcattgagtttgaatggacaacttgagattgctggtcga
atgataaaggtgtccacagtcacagatcagcctggactgcaagatatcggagcaagtaca
ggagaccttgacgatgaagatggtgttggcttgtccttaaatgctagttctcgagcatcc
ctgatgcagaaactggaccgtactggcactgcatctagcattgctggttctttaggtaca
catgtcgtaaataacacaggcgctaccatggcaatggcgccaatccttggagttggaact
atcccttccctgggtgttgctacttctttggtctccgttcctgcttttcctggacttggt
gcagcaggcgttcaggttcccactgttgctgctaatttacttggtgttggtactccaagt
gaatgcttactattgaagaatatgtttgatcctacagctgagttggaaccaacttttgat
atggatatcagagacgacgtggaagaggaatgctctaggttcggaaagttgaaacatata
tacgttgacaagaatagtgccggttttgtatacttgagatttgcaaattcagaggctgca
atggatgcacaacgtgcccttaatggaagatggtttgctgggaaaatgatcggcgcaact
ttcatggacatcccgagctacgaagcgaaatttccagacagcagatag
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