Entry |
|
Symbol |
recB
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Name |
(GenBank) exodeoxyribonuclease V, subunit beta
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KO |
|
Organism |
cper Chlamydia pecorum W73
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cper00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CPE2_0008 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cper03400]
CPE2_0008 (recB)
Enzymes [BR:cper01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CPE2_0008 (recB)
DNA repair and recombination proteins [BR:cper03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPE2_0008 (recB)
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
complement(7566..10682)
|
AA seq |
1038 aa
MEAFNIFDPLTSIQGKFFLEASAGTGKTFTIEHIILRALLEDTLSHPDKVLAVTFTNAAT
NELKQRIHATLRSCLETLSHFDITHKDLPPYLSSQADVKLLYMKIRNAMATVDQMSIFTI
HGFCNFVLQQYFPGVQLRPQHPALTHTQVISRHIQDYLSQDLWKQVMSTEQFRLLTIRYN
VTSKHTISLIEKLLSSYGEESPSLLPSLQHVQETLNLWHRQLSSHLQNFPKENFYSQLLQ
CAKGFKKQPFSIDEDLSVFVDLLYSPLPSPKLFSFTKLAQTFQEKHRLMRYRPCAALDLL
QNASWQKHTEAFCNVDLIFNTLLYDIQNYLKRHYTPWISPDESIVVLEKLLSSPEAQRIV
SSLRERYQLVLIDEFQDTDKKQWNIFSLLFAHENFSGSLFLIGDPKQSIYEWRNADLPTY
LKAKSSFPKHSQLYLLNNYRSTPKLMHAINHLFQKISPFLEISGYPPIEYSPLIPKALHE
FSSSHAPIHFFPYEDRVSQALWISSEALHLQKHHQIPLGNMAILVSDSSQAFDFITHCSL
PVSFSKKKSVLHLTETYLLTLAMLEALLFPENYERISRVLLSSLFGLSASQISQEKERFT
TYFLSLRSHLFQHGLLATFYFLCSTQGETLLSTPQGDLIFQEMEKLCSYLDSLSSHPYQQ
LLHLQFFSETGRWEEELALSLHAQDPNTLKITTIHSSKGLEYDVVFCIGLDTHKKNKSPS
ESLREMYVACTRAKKQLYIPLSLQKQHSSALSHYLQAVGSYATLEELVTHLIQEQPELFS
YSSEAPSFSPLNFDFLPPETFSLSLPSPKKIYSFSSVKLLDSQDPPESLHSSITLSKTHL
PLGKKTGLLMHKILEEALLMPHSDLSRIRSIIYPLVQNTHLEGYEPMIEQLLTTVFSFPL
TFSSQTFTLEEISKNHMFKEVSFLFSQEEELWQGVIDLFFKHQDHYYIIDWKTSFLGENT
SDYTPERLRAYIQKEKLDLQGYIYIDAAQKFLRQFDIHHNVEMGFVFLRGLDTLGNGFFP
LEARFSTPTIIQKYPVYH |
NT seq |
3117 nt +upstreamnt +downstreamnt
atggaagcttttaatatctttgatccgctcacctctatccaagggaagttttttttagaa
gcttctgcaggcacaggaaaaacattcactatagaacacatcatcctccgcgcccttcta
gaggataccctatcccatcccgataaggttttagcagtaaccttcactaatgcagcaaca
aacgagttaaaacaacgcattcacgccaccctaagaagctgtctcgaaactctttcccat
tttgatatcacccataaagatctccccccctatctttcctcccaagcagatgtaaagctg
ctttacatgaaaattcgcaatgctatggcgacggtagatcagatgtcgatatttacgatt
catggcttttgtaatttcgtattacaacaatattttcctggagtccaattacgtcctcaa
caccccgcgcttacacatacgcaggtaatttctcgtcatatccaagattaccttagccaa
gacctttggaaacaggtgatgagtacagaacagttccgcttgcttaccatccgctataat
gtcacctctaaacacacaatttctctcatagaaaagctgctatctagttatggtgaggag
tccccctctctcctcccttcattacagcacgtacaagaaaccctaaatctttggcatcgt
cagctctcgtcgcaccttcaaaactttcccaaggaaaatttttactctcaacttttacag
tgtgctaaaggctttaaaaaacagcccttttccatagatgaagatctctctgtatttgta
gatttactctattctcctcttccctctccaaagcttttttcctttactaagcttgctcaa
accttccaagaaaaacaccgtttgatgcgctatcgtccttgtgcagctttagatctttta
caaaatgcttcttggcaaaagcatacagaagcattttgtaatgtggatcttatctttaat
accttactctatgacattcaaaactatttaaagcggcactataccccatggatttctcct
gatgagagcattgtggttttagaaaagctactttcctcccctgaagcccaaaggatcgtt
tcttctttaagggaacgctaccaactagtccttatcgatgaattccaagatactgataaa
aaacaatggaatatcttctctttactctttgctcatgaaaatttctctggatccctattt
ctcattggggaccctaagcaatctatttatgaatggagaaacgctgatctccccacgtat
ttaaaagccaagtcttctttccctaaacattctcagctttacctcttaaataactaccgc
tccacccccaagcttatgcatgccatcaatcacctgttccaaaagatttctccgttttta
gaaatctctgggtatccccctatagaatactctcctctcatccctaaagcgctccatgaa
ttctcttcttcccatgcccctatacattttttcccttatgaagatcgcgtttcccaagcc
ttatggatctcttctgaagctctacacttacagaagcaccaccagatccctctagggaac
atggcaattttagtctcagactcttctcaagcttttgattttattacgcactgctctctt
cccgtatctttttctaagaaaaagtctgttcttcatcttactgaaacctacttgctaact
ctagcgatgctagaagctcttctttttcccgaaaactacgaacgaataagccgcgttttg
cttagcagcttatttggattgtcagcatctcaaatctctcaggaaaaagaacgtttcaca
acatatttcctttccttacgctctcatcttttccaacatggcttgttggctactttctat
tttctctgctcaactcaaggagaaaccctcctaagcaccccacagggggatcttatcttt
caagaaatggaaaagctttgcagttatttagattctctttcttcccatccttaccagcaa
ctgctgcatctgcaattcttctcagaaacaggaaggtgggaagaagagcttgctttatct
ttgcatgctcaagatccgaacacattaaagatcaccacgatccactcatctaaagggctg
gaatatgacgttgttttttgtattggcctagatacccataaaaaaaacaagtctccttca
gagtctctaagagaaatgtacgttgcctgtacaagagcaaaaaaacagctttatattccc
ctctctttgcaaaagcagcactcctctgctctttctcactatcttcaggctgtaggctct
tatgctactcttgaagaacttgtaacccacctcatacaagagcaaccagaactgttttct
tattcctcagaagcaccatctttctctcctttaaattttgatttccttcctccggaaacg
ttctccttatccttgccctccccaaaaaaaatttattctttctcttcagtaaaactacta
gattctcaggatcctccagaatccttgcattcttctataactctctctaagacccatcta
cctctaggaaaaaaaaccggactcctgatgcataaaatcttggaagaggcgctcctaatg
ccacatagtgatctctcccgaatacgttctatcatctatcctctcgtacaaaatacccac
ctggaaggttatgaacccatgatagaacagctgctaactacagtattttcttttccttta
acgttttcatctcagacatttactttggaagagatctcaaaaaatcacatgtttaaggag
gtctcttttcttttctctcaagaagaagagctgtggcagggggttatcgatctctttttc
aaacatcaagatcattattacattatcgattggaaaacttcctttcttggagaaaatact
tctgactataccccagaacggctccgagcttatatccaaaaagaaaagttagatttgcaa
ggatacatttatatagatgctgctcaaaagttccttcgacaatttgatatccaccacaat
gtagaaatgggatttgtatttcttcgaggtctggacaccttaggaaacggattttttccc
ctagaagctaggttttctactcccacaataatccaaaaatatccggtctatcattag |