Chlamydia pecorum W73: CPE2_0135
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Entry
CPE2_0135 CDS
T02855
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
cper
Chlamydia pecorum W73
Pathway
cper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPE2_0135 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cper03021
]
CPE2_0135 (rho)
03019 Messenger RNA biogenesis [BR:
cper03019
]
CPE2_0135 (rho)
Transcription machinery [BR:
cper03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CPE2_0135 (rho)
Messenger RNA biogenesis [BR:
cper03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CPE2_0135 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
AAA_25
S1CSD-TOTE-2
Mor
AAA
OB_RNB
NACHT
Spore_III_AA
DUF5855
Motif
Other DBs
NCBI-ProteinID:
AGW38560
LinkDB
All DBs
Position
133323..134714
Genome browser
AA seq
463 aa
AA seq
DB search
MKEERSSEVLPKVKENKKYASSAQEKPFVGESSVVVSEPEEALPVTTTKIAKLQRMGIEE
LNVLARQYGVKNIGSLTKSQVVFEIVKAKSERPDELLIGEGVLEVLPDGFGFLRSPTYNY
LPSAEDIYVSPAQIRRFDLKKGDTIIGTIRSPKEKEKYFALLKVDKINGSTPDKAKERVL
FENLTPLYPNERIVMEMGKDKLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHAI
AVNNPDIVLIVLLIDERPEEVTDMIRQVCGEVVASTFDEQPERHIQVAEMVIEKARRLVE
HGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLTI
LATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRIYPAIDLIKSGTRKEELLYHPC
ELEKVYLFRQAIADLTATDAMHLLLGRLKKTNSNAEFLLSLKE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaacgttcttcagaagtcttgcctaaggtgaaagaaaacaaaaagtatgca
agctctgcacaagaaaaaccttttgtaggagagagttctgttgttgtcagcgaacctgaa
gaagccttgcctgtgacaactacaaaaattgcgaagttgcaaaggatgggcatagaggaa
ctcaatgttttggctcgtcaatatggggtgaaaaacattggttccctaacaaaatctcaa
gtggtttttgagattgttaaggcgaagtctgagcgtccagatgagctcttaattggcgag
ggggtgttagaagtccttcctgatggttttgggtttttacgctcccctacatataattat
ttgccttctgctgaagatatttatgtttctcctgcacagatccgccgttttgatttgaaa
aagggcgatacgatcattgggactatacgttctccaaaggaaaaggaaaagtattttgcc
ttattgaaagtggataaaattaatgggtcgacgccagataaagcaaaagagcgcgttctt
tttgagaacttaacacctctatatcctaacgaaaggatcgttatggagatggggaaagac
aaacttgctgagcgtgttttggatttaacggctcctattgggaaagggcagagagggttg
attgtagcgcctccacgttctgggaaaacggtgatattacaaagcatagcacatgcgatc
gctgtgaataatcctgacattgtgttgattgtattgctgattgatgagcgccctgaggaa
gttacggacatgattcgacaggtatgcggagaggtcgtggcttcaacatttgatgagcag
ccagaaaggcatattcaagtggcagagatggtcatagaaaaggctcgccgtttagtagag
catggtaaggatgttgtgatccttttggattcaattacgcgtttagcacgtgcgtacaat
acagtacagcctcactctgggaagattttgactggaggagtggatgcgagtgcgttacat
aaacccaagcgcttttttggtgctgccaggaatatcgaaggtgggggatccttaacgatc
ttagcgactgcattaatagatacaggctcgagaatggacgaggtaatctttgaagaattc
aaaggtactgggaatatggagttagtattagaccgtcgtttatcagataggagaatctat
cctgcaatagatttgattaagagcggcactagaaaagaggaacttctatatcatccttgt
gagttagaaaaggtgtatctcttccgtcaagcgatagcagatttgacagctacagatgcg
atgcatctgcttttgggtcggctgaagaagacgaatagtaacgctgaatttctgctttct
ttgaaagaataa
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