Chlamydia pecorum W73: CPE2_0642 Help Entry CPE2_0642         CDS       T02855                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism cper  Chlamydia pecorum W73 Pathway cper03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:cper00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     CPE2_0642  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cper03400]     CPE2_0642 DNA repair and recombination proteins [BR:cper03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      CPE2_0642   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       CPE2_0642 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ABC_tran UvrA_inter SMC_N UvrA_DNA-bind nSTAND1 AAA_16 AAA_29 DnaJ_CXXCXGXG RsgA_GTPase NACHT AAA_21 Anti-TRAP Viral_helicase1 Motif Other DBs NCBI-ProteinID:  AGW39047 LinkDB All DBs Position 730008..735401 Genome browser AA seq 1797 aa AA seqDB search MTPFPIHLSGITVRNLKNLSVTFHSGEIVLLTGVSGSGKSSLAFDTIYAAGRKRYIATLP TFFSTTQTSLPNPKVQSIQGLSPTIAVKQNHFAHHHHATVGSTTELFSHLALLFALDGEA RDPETLNTLNIQSKEQILATLQDLPENTSLTLLAPLLHKDPMGVQNYIRQGLTKVSILGE SHPIYEFLSSGIPDDSPAELIVDSLIKNESNSARLKVSLFSALALGEGSCSVLIGQKRHS FSTQVHLGSRTFSPLTPQDFSPTSLQGRCPLCQGSGLHITIQDPHLLNETLSIRENCCAL AGNCSTYLTHTIYQALADALHFSLDTPWKLLPKHIQNTFLWGDKHLALPVRLFDPVTGKR SLSYKLWKGVLNEIADKVRYAKQPSSQLPEGTTCHTCSQCHGSGIHEYASAASWKGKTFS EFQQLPLSEWLAFLSSQTKSSSTKEILEGLCQRLSFLVELGLGYLTPNRSLATLSGGEQE RTALAKHLGAGLRGITYVLDEPSIGLHPKDTDKLISMIQKLRDQGNTIILVEHDERMISF ADRIIDIGPGAGIFGGKILFNGTPQDFLSYGTSLTAKHLRNELSIAIPEPREKASSWLSL THATTNNLKNISIRLPLQRLSTVTGVSGSGKSSLINDTLVPAVEAFLHSGQLPDTLSFEH GTISRLIHISRDLPGRSSRSIPLTFIKAFDTLRELFASQSHSRSLGLTKSHFSFNSPQGA CTECRGLGEISLSEDEPSTTCPECHGSRYQKHILEVTYRGKNIAEVLAMTSYEAATFFSH LPSLYEKLHALNSLRLDHLPLGRPLSTLSGGEIQRLKLAYELLLCSSKPTLYVLDEPTTG LHTHDILALIQVLRSLTHQGHTVIVIEHNMHVVKVSDHVLELGPEGGQKGGYLIASCSPR ELIKLSTPTAQCLAPYMSMSSQPPKLPPKTPSLKSNQNIFIENAYHHNLKHLNLSLPNNA LISVGGASASGKHTLVFDVLYASGNIAYAELFPPYIRQELLKETPRPHVGKVLGLSPVVA VRKRGTQRHSRHTLASALDISDSLEKLFALLGEPHSPITGEKLEKLTPQGFIDTLMKNSL DLYVTVTAPLPPEENLELFLQAKRKEGFLKLFANGKIFDLDDPLSFPLEDPALVVQHIKI SPKNKISLLSALSLSLSLSPTPKLYIHDHDRLHMLPYSQSWQDSLGISYPEISRDLLSRD HKEGQCQQCRGSGKLLTFSLHHHKEKLRHYTLEKLLAFLIPKSLLSSTLKALPIPQNILI EDLSEKDFQNLCLGTPQYPGLEELLKEHISYTDPLIKPFLISEVCSACEGWGLHDYARNV RINAISLPEIYQEDTTFLKRFLQEIREDCAKLLIQDLKTRISFIEQVGLDYISLKQTQDT LSEGERYRLHLAKKISSNLTDIVYLLESPLEGLHPHDFPLLLALLNTLVSNHNTVIATDR GNLLAPYAHHSLYLGPNSGPEGGFLCSPEETPLPEISIPPVDPSLPKLAVNLSIHHIQNL EVSAPLRSVVALAGVSGSGKTSLLLEGFYKEALRQKSSSIFSDILILDSHSLPSSQRSDI STYFDIAPHLRAFYASLTKAKALGISETMFSTNTKKGQCADCLGMGYQLIDRAFYALEKR QCPTCSGYRIQPLAQEVTYEGKHFGQLLHTPISAIATMFPFIRKIQPALQALQQLNLGYL PLGEKLSSLSQSENMSLKIAKNLYLPLKKPTLILMDEISSSLDSLRKRKLLIKFHELAAS GHSIFFIEHDIEMLKYANYLIELGPKAGKEGGKLLFCGPPKELPSSTTSILKNYLRF NT seq 5394 nt NT seq  +upstreamnt  +downstreamnt atgacaccatttcctattcatctttctggaattaccgtaagaaacctcaaaaatctttcc gtcacttttcactctggggaaatcgttttactcactggcgtttcgggatcagggaagtcc tcattagctttcgacacaatctatgctgcaggaagaaaacgctacattgcaactttacca acatttttctccacaacgcaaacctctcttcctaatcctaaagtccaaagcattcaagga ctctctcctacaattgccgtaaaacaaaaccactttgcccatcatcaccatgccactgta ggaagcactacagaacttttctctcaccttgctcttctctttgctctagatggtgaagcc cgagatcccgaaactcttaacaccttaaatatccaaagtaaagagcagatcctcgctacc ttacaagatctccctgaaaatacctctcttactcttcttgctccccttctccacaaagac cctatgggagtacaaaattacattcggcaaggtctcacaaaagtctctatccttggagaa tcccatcctatatatgaatttctctcttctggaattcccgatgattctccagccgaactc attgtagactctctcatcaaaaatgaaagtaactctgcaaggttaaaggtgagtctattt tcagcattagccttaggggaaggctcctgctctgttcttatcggtcaaaaacggcactcc ttttctacacaagttcaccttggcagccgcacattctcccccctcactcctcaggacttc tccccaacaagtcttcagggccgctgccccttatgtcaaggctctggcctacacatcacc atccaagatccccatcttctcaatgaaaccctttctatccgagaaaactgctgcgcccta gcaggaaattgttctacttatctcactcatacgatttatcaagccttagccgatgcgtta catttcagcttagatactccctggaaacttcttcctaaacacatccaaaacaccttccta tggggagataaacatcttgctcttcctgtccgtctctttgaccctgttacagggaaacgc tctctttcctacaagctttggaaaggggttcttaatgagatcgcagataaggtacgctat gccaaacaaccctcgagtcagcttcctgagggaactacatgtcatacctgctcacaatgt catggatcaggaattcatgagtatgcctctgcagcttcctggaaggggaagacattttct gagttccaacagcttcccctttctgaatggctcgcgtttctctcttcacaaacaaaatcc tcttctacaaaggagattctcgaaggcttatgtcagcgactttctttccttgtggaatta ggcttgggctacctcacaccaaaccgctccttagcaaccctctctggaggagagcaagaa cgcactgcacttgcaaaacatctcggcgctggtcttcggggaattacctatgttcttgat gagccttctatagggttacatcccaaagatacggacaagctcatttcgatgatccaaaaa ctccgcgatcaggggaacactatcattctcgtagagcatgatgagaggatgatttctttc gcggatagaatcattgacattggccctggtgcaggaatctttggggggaaaattctcttt aatggcacccctcaagactttctttcttacggcacatctctcacagcaaagcacttaaga aacgagctttctattgccattcctgaacctcgagaaaaagcctcatcttggctctcgcta actcacgccaccacaaataacttaaagaacatctccatacgtcttcccttacagcggctc tctacagtcaccggcgtatcaggatcagggaagtcctccctaattaacgacactctagtc cctgctgtggaagcattcttacatagcggacaactccctgacaccttatcatttgaacat ggcaccatctctaggctcatccatatctctcgggatctccctgggcgctcctcacgctcc attccactcactttcataaaagcttttgacacacttcgcgagctctttgcctctcaatcc catagcagatccttagggctaacgaagtcccactttagcttcaactccccgcaaggagcc tgcacagaatgtcgcggattaggagagatttctctatctgaagatgagccttcgacaaca tgccccgaatgtcacggctcccgctaccaaaagcacattctcgaagttacctatcgggga aaaaatattgctgaggttctcgcaatgacctcctatgaagcagctactttcttctctcac ctcccttccctttacgaaaagctccatgcgttaaactccctaaggttggatcacctcccc ttgggaaggcctctatctacactttctggaggggaaattcaaaggctaaagcttgcctat gagcttcttttgtgctcatcaaaacccactctctatgtccttgatgagcctacgacagga ctgcacacccacgatatccttgccttaatccaggttctacgttcgctcactcaccaagga catacggttatcgtgatagaacataacatgcatgtcgtaaaagtttctgaccatgttctc gaactcggtcctgaaggaggacagaagggagggtatctcatcgcctcctgctcccctagg gaactcatcaagctctctacccccacagcacaatgtcttgctccttatatgtctatgagc tcccagccccctaaactccctcctaaaacaccttctttgaaaagcaaccagaacatcttt attgaaaatgcctatcaccacaacctcaagcacttaaacctttctcttcctaataacgcc ttaatttccgtagggggagcctcagcatcagggaagcacactctagtctttgatgttctc tatgcttctgggaacattgcctatgcggaacttttccctccctatatccgtcaggagctc cttaaggaaactcctcgtccccatgtggggaaggtccttgggctttctcccgtagtagct gtaagaaaacgaggaactcagcgtcattccaggcacaccctagcttcagcactagatatt agcgatagtttggaaaagctgtttgctcttcttggagaaccccactcccccattactgga gaaaagttagaaaaactcactccccaaggatttattgataccctaatgaagaactcctta gatctctatgttactgtgacggcacctttgcctcctgaggagaatctcgagctcttcctc caggcaaaacgtaaagagggcttcttaaagctattcgcaaatggaaaaatctttgatctt gatgatcctctctccttccctcttgaggatcctgctcttgtcgtacaacatataaaaatc tcccctaaaaataagatctccctactctcggcattatctttatctctatccctatctcca actcctaaactctatatccatgatcatgaccgtctccatatgcttccctactcccaaagt tggcaagattccttaggaatttcctatcctgaaatttctagagatctcctctccagggac cacaaagaaggccagtgccagcaatgccgcggctcagggaaactcctgacgttctccctc caccaccataaagaaaaactccgccactataccttagaaaagctcctagcattcctcatc cctaaatctcttctttcttccactcttaaagctctccctatcccgcaaaacattcttata gaagatcttagcgagaaagacttccagaatctctgtctagggactcctcaatacccagga cttgaagaacttcttaaagaacacataagctatacagatcctttgattaagcccttcctt atttcggaggtctgctctgcatgtgaaggttggggtcttcatgactatgctcgcaatgtc cgtatcaatgctatatctctgccagagatctatcaggaggatacgacctttttgaaacgc ttcctccaagaaatccgagaagattgtgcaaagctccttattcaagatctaaaaactcgt atttcctttattgaacaagtcggtcttgactacatctccttaaagcaaacacaggacact ttaagtgaaggagagcgctatcgcctccatttggcaaaaaaaatctcttctaaccttact gatattgtctatcttctcgaatctcccctagagggacttcatccccatgacttcccactg ctccttgcgctgctaaatactcttgtttctaatcacaataccgttattgcaacagatcga gggaaccttcttgctccctatgcacatcatagcctctatcttggtcccaactccggtcct gaaggaggcttcctgtgttcccctgaggaaactcctctccctgaaatttctatccctcct gtggacccatccttacctaaattagctgtaaacctctccatccatcacattcaaaatctc gaagtctctgctcctttacgttctgttgttgcccttgcaggagtatcgggatcagggaaa acttctcttctgcttgaaggcttttacaaagaagctctgcgtcagaagtcttcctcgata ttttctgatattcttattttagattcccattctttaccttcctctcagcgctccgatatt agcacctatttcgatatcgctccgcatttacgtgcattttatgcttcgctaacaaaagcc aaagctctggggatctctgagacgatgttcagcacaaatacaaaaaaaggccagtgtgcg gattgcttaggcatgggctatcaacttatagaccgcgcattttatgctctggaaaaacgc cagtgccctacctgctcaggataccgcatacagcccctagcacaggaggtaacctatgaa ggaaagcactttgggcagctacttcatactcctatttctgctatcgctacgatgttccct tttattcggaaaatccaacctgctttgcaggctctgcaacaactaaaccttggctatctc cctcttggagaaaagctctcttccctctcacaaagcgaaaatatgtccttaaaaattgcc aaaaacctctacctacctttaaaaaagcctacgctaattcttatggatgagatctcttcc tctctggattccttaagaaagcgtaagctcctcataaaattccatgaacttgcagcttct ggccactcaattttcttcatagagcacgatatagaaatgctaaagtacgccaactatctt attgaactcggccctaaagccggaaaagagggagggaaacttctcttttgtggtcccccg aaagaactcccttctagtactacctcgatccttaaaaactatctacgcttttaa

DBGET integrated database retrieval system