Clostridium perfringens ATCC 13124: CPF_0001
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Entry
CPF_0001 CDS
T00378
Symbol
dnaA
Name
(GenBank) chromosomal replication initiator protein DnaA
KO
K02313
chromosomal replication initiator protein
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CPF_0001 (dnaA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpf03032
]
CPF_0001 (dnaA)
03036 Chromosome and associated proteins [BR:
cpf03036
]
CPF_0001 (dnaA)
DNA replication proteins [BR:
cpf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CPF_0001 (dnaA)
Chromosome and associated proteins [BR:
cpf03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CPF_0001 (dnaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DnaA
Bac_DnaA_C
DnaA_N
IstB_IS21
AAA
AAA_14
Hda_lid
DNA_pol3_a_NII
ATPase_2
AAA_22
RNA_helicase
AAA_16
AAA_19
AFG1_ATPase
SLFN-g3_helicase
ResIII
KAP_NTPase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ABG83425
UniProt:
Q0TV64
LinkDB
All DBs
Position
411..1784
Genome browser
AA seq
457 aa
AA seq
DB search
MDAQLNNLWEQALNIIKGEISEISFNTWIKSCTPISISDNILKLSVPNEFTKGILDTRYK
DLLIQALKIVTSRKFKIEFYLESDLEEEKENEEKQKEEKKENTNDVDGSIVVSDEMSATL
NPKYTFQSFVIGNSNRFAHAASLAVAESPAKAYNPLFIYGGVGLGKTHLMHAIGHYILQE
NPKAKVVYVSSEKFTNELINAIKDDKNEEFRNKYRKVDVLLIDDIQFIAGKERTQEEFFH
TFNALHEENKQIILSSDRPPKEIPTLEDRLRSRFEWGLIADIQPPDFETRMAILKKKADV
EGLNVPNEVMVYIATKIKSNIRELEGALIRIIAYSSLTNRDVSVDLASEALKDIISNKES
APVTVKTIQESVANYYNLRIEDLKSQRRTRNIAYPRQIAMYLSRKLTDMSLPKIGEEFGG
RDHTTVIHAYEKISENLKTDEGLQSMINDITKKLTQK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccaactaaataatctctgggaacaagcattgaacataataaaaggagaaatt
tctgaaataagctttaacacttggattaaaagctgtactcctatatcaatttcagataat
atattaaaactttctgttcctaatgaattcactaaagggattttagatacaagatataaa
gacttattaattcaagctttaaagatagttacatctagaaagtttaaaatagagttctat
cttgagtctgatttagaagaagaaaaagaaaatgaggaaaagcagaaagaagagaagaaa
gagaatacaaatgatgtcgatggatctatagttgtaagtgatgaaatgtcagctacatta
aatcctaaatatactttccaatcctttgtaataggtaatagtaaccgctttgctcatgca
gcatctttagctgttgcagaatcaccagcaaaagcttataacccattatttatctatgga
ggagtaggacttggaaaaactcacttaatgcatgcaataggacattatattcttcaagaa
aatcctaaagcaaaagtagtttatgtatcatctgaaaaattcactaatgaacttattaat
gctattaaagatgataagaatgaagagtttagaaacaaatatagaaaagtcgatgtttta
ttaatagatgatattcaattcatagcaggtaaagaacgtactcaagaagagttcttccat
acctttaatgctctacatgaagagaataaacaaattatactatcatcagatagaccgcct
aaggaaattcctacattagaagacaggttaagatctagatttgaatggggtttaatagca
gatattcaaccacctgatttcgaaactagaatggcaatactaaagaaaaaagctgatgtt
gaaggcttaaatgtaccaaatgaagttatggtatatatagctactaaaatcaaatcaaat
ataagagaattagaaggcgcacttataagaataatagcttattcctctctaactaatagg
gatgtaagcgttgatttagcttcagaagcacttaaagatataatatctaataaagaaagt
gctccagttacagtaaaaactattcaagaatccgtagcaaattattataatttaagaata
gaggatttaaaatctcaaagaagaactagaaatatagcttatcctcgtcaaattgctatg
tatttaagtagaaaacttacagatatgtctttacctaaaataggtgaagaatttggtgga
agagatcatactacagtaattcatgcttatgaaaaaatttctgaaaatttaaagactgat
gaaggtctacaaagcatgattaatgacattactaaaaagcttactcaaaagtaa
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