Clostridium perfringens ATCC 13124: CPF_0034
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Entry
CPF_0034 CDS
T00378
Name
(GenBank) transcriptional regulator, TetR family
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpf03000
]
CPF_0034
Transcription factors [BR:
cpf03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CPF_0034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_24
TetR_C_41
TetR_C_29
TetR_C_37
HTH_Tnp_1_2
TetR_C_8
TetR_C_23
DUF676
TetR_C_3
TetR_C_27
TetR_C_13
TetR_C_45
Motif
Other DBs
NCBI-ProteinID:
ABG85055
UniProt:
A0A0H2YVR7
LinkDB
All DBs
Position
42133..42702
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AA seq
189 aa
AA seq
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MNRTKKAIFEAAINVFATSGYNGSTVDEIASKANVAKGTLYYNFKSKEEIFNFVISKGLE
IWHEKLTDIENLEDEPIEKLKKLFKMQFELLYENRAFFKMVMSQLWGKETRQDELRNKIT
EYIEGIERILKEAISKKQIRECDISLLAHSLFGSLISTSLYELSRDKEFNVNKVIDEITI
NILDGIVIK
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaactaagaaagctatttttgaagcagctataaacgtttttgctacttcaggt
tataatggatcaactgtagatgaaattgcatctaaagctaatgttgctaagggaacactt
tattataattttaaaagtaaagaggaaatttttaattttgtaattagtaaaggcttagaa
atttggcatgaaaaattaactgatatagaaaatttagaagatgagcctatagaaaaatta
aaaaaactttttaaaatgcaatttgaattattatatgaaaatagagcattttttaaaatg
gtaatgagtcagctttggggaaaagaaactaggcaggatgaactaagaaataaaataact
gagtatattgaaggaatagagagaatattaaaagaagctatttccaaaaaacaaataaga
gagtgtgatatttccttactagctcacagtttatttggaagtcttatatcaacatcccta
tatgaattaagtagagataaagagtttaatgttaataaagttatagatgagattacaatt
aacatcttagatggtatagttataaaataa
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