Clostridium perfringens ATCC 13124: CPF_0206
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Entry
CPF_0206 CDS
T00378
Name
(GenBank) putative nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpf03400
]
CPF_0206
DNA repair and recombination proteins [BR:
cpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPF_0206
Archaeal homologous recombinant proteins
CPF_0206
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
GTA_TIM
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
ABG84867
UniProt:
A0A0H2YUV9
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Position
251689..252912
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AA seq
407 aa
AA seq
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MRILHTADWHLGKNLEGLSRMDEQERFLEDFVHIVKDNNIDLVIIAGDVYDSSNPPARAE
KMFYDTLKKISANGERMTLVISGNHDNPERLVAAGPLAREHGIVMVGTPKSIVEVGEYGR
NKVLNSGEGFIELDINGEKSVILTVPYPSEKRLNEVLYGAMDETCERIKSYSDRIKLLFD
SLKGNFKEDTINLVVSHLFATGAENTGSERNIELGGSFIVDKECFPEEAQYIALGHIHKP
MILPGTNKKIRYAGSPLQYNKKEISFEKKCFIVDVKANEEANIDEIKFDVYKPIEVWKCD
SIDEAIYKCEENKDRECWVYLEIKTDRYIREDEIKAMKKLKGDIIEIIPKITLDEEENDE
RSFSEKSFEELFTDFYEKERGVKPEEDLLELLLNIVKEEGDEENETN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaggatacttcacactgctgattggcatttaggaaaaaatttagaaggattaagtcgt
atggatgagcaagaacgatttttagaggattttgttcacatagtaaaggataataatata
gatttagttattatagcaggggatgtatatgattctagtaatcctccagctagggcagaa
aaaatgttttatgataccttaaaaaagatatcagctaatggagagaggatgactttagtt
atttcagggaaccatgataatccagaaagattagtggctgcaggtcccttagcaagagaa
catggtatagtgatggttggaactcctaagagtatagttgaagtaggggaatatggaaga
aataaagttttaaattcaggagaaggatttattgaattagatataaatggagaaaagtct
gtaatattaactgttccatatccaagtgaaaagagattaaatgaagttttatatggtgca
atggatgaaacttgtgagagaataaaaagttatagtgatagaataaagcttttatttgat
tctcttaaaggaaattttaaagaggatacaattaatttagtggtatctcatctttttgca
acgggagcagaaaatactggttcagagagaaatatagagcttggaggaagtttcattgtt
gataaggaatgtttcccagaagaagctcaatatattgctttaggacatatacacaagcct
atgattctaccaggaactaataaaaagataagatatgcaggttcaccacttcaatataat
aaaaaagaaataagctttgaaaaaaagtgttttattgtagatgttaaagcaaatgaggaa
gcaaatatagatgaaataaaatttgatgtgtacaagcctatagaagtttggaagtgtgat
agcatagatgaagccatttacaaatgtgaagaaaataaagatagagaatgttgggtttat
ttagaaataaaaacagatagatatataagagaagatgaaataaaggccatgaagaagctt
aaaggggatattattgaaattattcctaagataacactagatgaagaggagaatgatgaa
agaagtttttcagaaaaatcttttgaagaattattcactgacttttatgaaaaggaaaga
ggggttaagccagaggaagatttattagagcttttacttaatatagttaaagaggaaggg
gatgaagaaaatgaaaccaattag
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