Clostridium perfringens ATCC 13124: CPF_0207
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Entry
CPF_0207 CDS
T00378
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpf03400
]
CPF_0207 (sbcC)
DNA repair and recombination proteins [BR:
cpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPF_0207 (sbcC)
Archaeal homologous recombinant proteins
CPF_0207 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
Amnionless
SMC_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABG83165
UniProt:
A0A0H2YQC4
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All DBs
Position
252899..256417
Genome browser
AA seq
1172 aa
AA seq
DB search
MKPIRLEVKGLNSFIDKQVVEFDKLTERGLFGIFGPTGSGKSTILDGITLALYGDIARKS
SNYINTNCDGVYVSYEFQITGNEVKRYRVDREFKRDNKSGGIRNKSSKIIDITGGVENVL
EEKAKAVTSKCEEIIGLKLDDFMRTVVLPQGKFSEFLKLEGKERRNMLERLFNLRKYGDD
LSSKLSFEIRKEKDKMNVLEGQLKGYEGISEEALKAKEEEIKEINLSIKSKEELLNKIKK
EFEEAEKVWNTQKELYDKRIEEESLVSRSEEIKSFKERVEISNKADKVIVFINNLEDILK
EINKEDLKFSELNKKLEELINLREENKLKFEEVAKKKEEKLPDLRLKKEKLLESQKEREI
LFQIKADGVKLKEACKKIFEDRSKCDTKLNSIEENEKRLNEELKEKEERKEELFVHEEFK
NKINSGLFILNSYESLDKQFNEIKSEEAELKRYIKELTEDKEKSEKDLKVKIESLGKTRD
KLESLLKETPGDSNSILEKQIKLGEYREKLNKYKEIKNSLEESLKTKNNFEEKLKGFENQ
KLLLEKEVRELKEYINKVKVEELAHKLRENLVDGECCPVCGSTHHELNKVEKINLDESNQ
KTTLLESKEEKLKELILEFSKIEATLEYENKKIEELNISIEEVGEVNEERLKSLEEEFNT
LKDKIEEFNLKKENLEKNLEKLKEEKNNLENIFNKAEVILCEKIVREKEIASKVKELDKE
LKLKISELNSIKNELKIEDIKLENELILKKEKEKNLLEKEIRILRTQLEESNKIKDELRE
KRDELKENYLSQKSLLDGKVEVYREKERMIKGALKGLIDEALPIEKIDIKGLLEDLQLEI
DYIEKAYLNLSEEKEKLEKAFNNMNQEMAVTKERVNSLNLRKENEEKKVNLALEEEGFKT
ILEVKGGILFKDEKEKLKILIEEYHNNFIKVRANIELLIKKLNGKSLTEEEWTRVLQEKN
NTEKELKEVEEIKIRLVTESESIKKKLEEQRDILHIKAKQEHKLALLSDLEKLFKGKKFV
EFIAANQLKYISIEASKKLKDITNGVYGLEVDENGKFIIRDYKNGGAERDASTLSGGETF
LASLALALSLSSQIQLKGTAPLELFFLDEGFGTLDDNLLDVVMSSLERLHHERLSVGIIS
HVESIKNRVPVKLILTPAEAGIGGSKVKIERS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattaggctagaggttaagggattaaatagttttatagataagcaagttgtt
gaatttgataagttaacagagagagggctttttggtatttttggacctactggaagtgga
aaatctacaattctagatggaataacccttgctttatatggtgatattgcaagaaaaagc
tcaaactatataaatactaactgtgatggtgtctatgtaagttatgagtttcaaataaca
ggtaatgaagtaaaaaggtatagagttgatagggaatttaaaagagataataaaagtggc
ggaataagaaataaaagttcaaagataattgatataacaggcggagttgaaaatgtacta
gaggaaaaggcaaaggctgtaacttcaaagtgtgaggagattatagggctaaaattagat
gattttatgaggactgttgttcttccacaaggaaagtttagtgaatttcttaagctagaa
ggaaaagagagaagaaatatgcttgagagattatttaatcttagaaaatatggtgatgat
ctttctagtaagcttagttttgaaataagaaaagaaaaagataagatgaatgtcttagaa
ggacaattaaagggatatgagggaattagcgaagaagctttaaaagcaaaggaagaagaa
attaaggaaatcaacttaagtattaaaagtaaagaagagttattaaataagataaaaaaa
gaatttgaggaagcggaaaaagtttggaatactcaaaaagaactttatgacaaaagaatt
gaagaagagagtttagtaagtagaagtgaggaaataaaatcttttaaagaaagggttgaa
atttcaaataaggcggataaggtaatagtatttataaataatcttgaagatattttaaag
gaaataaataaagaggatttaaaatttagtgagttaaataagaaattagaggaacttata
aatttaagagaagaaaataagctaaagtttgaagaggttgctaaaaagaaggaagaaaaa
ttacctgacttaagattaaagaaggaaaagttattagaaagccaaaaggaaagagagata
ctttttcaaataaaggctgatggggttaaattaaaggaagcttgcaagaagatttttgag
gatagaagtaaatgtgatactaaattaaattctatagaagaaaatgaaaagagattaaat
gaagaattaaaagagaaggaagagagaaaagaagagctttttgtccatgaagaatttaaa
aataagattaatagtggattatttattttaaattcttatgaaagtttagataaacaattt
aatgagataaagagtgaagaggctgaattaaagagatatataaaagagcttacagaggat
aaagaaaagtcagagaaggatttaaaagttaagatagaaagtttaggtaagacaagggac
aaactagaaagtcttttaaaggaaacaccaggggatagtaattctattttagaaaaacaa
ataaaacttggagagtatagagagaagcttaataaatataaagagataaaaaattcttta
gaagagtccttaaagactaaaaataactttgaagaaaaacttaaaggttttgaaaatcaa
aaattattattagaaaaagaggtaagagagcttaaggagtatataaataaggttaaggtt
gaagaattagctcataaacttagagagaatttagtagacggggagtgttgtccagtttgt
ggatcaactcaccatgaacttaataaggttgagaaaattaatttagatgaatcaaatcaa
aaaacaactttattagaaagtaaggaagaaaaactaaaagagcttattttagagttctca
aaaatagaagctactttagaatatgaaaataagaaaattgaggaattaaatatttccata
gaagaagtaggagaagttaatgaggaaagattaaaatccttagaagaagagtttaatacc
ttaaaagataaaatagaggagtttaatcttaaaaaagaaaatctagaaaaaaatttagaa
aaattaaaggaagagaaaaataatttagaaaatatcttcaataaggctgaggttatttta
tgtgaaaaaatagttagagagaaagaaatagcttcaaaggtaaaagaattagataaggag
ttaaaattaaaaatttctgagcttaattccataaaaaatgaactaaagattgaggatatt
aaactagaaaatgagttgatattaaaaaaagagaaagaaaaaaatctattagagaaagag
attagaatattaagaactcagttagaggaatcaaataagataaaggatgaattaagagaa
aaaagagatgaattaaaggagaattacttaagtcaaaaatccttgttagatggtaaagta
gaagtttatagagaaaaggaaagaatgattaaaggagctttaaagggcttaattgatgaa
gctttacctattgaaaaaatagatataaaaggcttattagaagatttacaattagagatt
gattatatagaaaaggcttatttaaatctaagtgaggaaaaagaaaaactagaaaaagcc
tttaataatatgaatcaagagatggctgttactaaggaaagagtaaattcattaaatctt
agaaaagaaaatgaggagaaaaaagtaaacttagctttagaggaagaaggatttaagaca
atattagaggttaaaggggggattttatttaaggatgaaaaggaaaaattaaaaatatta
attgaagaataccataataactttattaaggttagggcaaatatagaattattaattaaa
aagttaaatggaaagagtttaacagaagaagaatggacaagggttcttcaggagaaaaat
aatactgaaaaagaattaaaggaagttgaagaaataaaaattagacttgttactgaaagt
gagtctataaagaaaaaacttgaagaacaaagggatatacttcatattaaagctaaacaa
gaacataagcttgctcttttaagtgatttagaaaaattgtttaaaggaaagaagtttgta
gaatttattgcagcaaatcaattaaaatatatatccatagaggcctctaaaaagcttaag
gatataactaatggagtttatggattagaggttgatgaaaatggtaagtttataataaga
gattataaaaatggaggtgcagagagagatgcctcaactctttcagggggagaaaccttc
ctagcttccttagccttagcattatcactttcatcacaaattcagttaaaaggaacagcc
cctttagaattattcttcttagatgagggctttggaactttagatgataatcttttagat
gtggttatgagttccttagaaagacttcatcacgaaagactatctgtaggtataataagc
cacgttgaatctataaaaaacagagttccagttaagcttatattaacaccggcagaggca
ggaataggtggaagcaaggttaaaatagagagaagttaa
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