Clostridium perfringens ATCC 13124: CPF_0343
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Entry
CPF_0343 CDS
T00378
Name
(GenBank) conserved hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpf03019
]
CPF_0343
Messenger RNA biogenesis [BR:
cpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CPF_0343
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_28
Myosin_head
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABG84634
UniProt:
Q0TU87
LinkDB
All DBs
Position
408684..409568
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AA seq
294 aa
AA seq
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MRFVIVTGLSGAGKTEATRSLEDLGYFCVDNLPPKLIPKFAEACVQSEGKIDKIALVIDI
RGGIFFDDLFESIEYLKANDFNYEILFLEASDEVLVKRFKETRRSHPLSPDGRIITGISE
ERMRLRELKDRADNIIDTSNYPIRNLREKINLLYGDGKPVEQNLSITVLSFGFKYGIPSD
SDLVFDVRFIPNPFYIPELKPFSGEDEPVKNYVLAQEETKGFLSRLSDMAEFLIPNYIKE
GKRQLIISIGCTGGRHRSVAIANALYKDLLCKNFHVTLEHRDINEDINRGDRKL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgtaatagttactggactttcaggggctggaaaaacagaagcaacaagaagt
ttagaagatttaggatacttttgcgtagataacttacctccaaagttaatacctaagttt
gcagaggcctgtgttcaaagtgaaggtaaaatagataaaatagcattagtaatagatata
agaggcggaatattctttgatgatttatttgaaagtatagagtatttaaaagctaatgat
tttaattacgaaattttattcttagaggcttctgatgaggttttagttaagagatttaaa
gaaacaagaagaagtcatccgctttcaccagatggaagaataataactggtataagtgaa
gaaagaatgagacttagagaacttaaggatagagctgataatataatagacacttcaaat
tatcctataagaaatttaagagaaaaaataaatcttttatatggagatggtaagccagtt
gagcaaaatctttcaataactgttttatcctttggatttaagtatggtattccatcagat
tcagatttagtttttgatgttagatttataccaaatccattttatattccagagttaaag
ccattttcaggggaagatgaaccagttaaaaattatgttcttgctcaagaagaaacaaaa
ggatttttatcaagactttcagatatggcagaattcttaatccctaattatataaaagaa
ggaaagagacaacttattatctctattggatgtacagggggaagacatagatcagtagcc
atagctaatgctttatataaagaccttctatgtaagaacttccatgttaccttagagcat
agagatattaatgaggatataaataggggagatagaaaactatga
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