Clostridium perfringens ATCC 13124: CPF_0482
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Entry
CPF_0482 CDS
T00378
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf00521
Streptomycin biosynthesis
cpf00523
Polyketide sugar unit biosynthesis
cpf00525
Acarbose and validamycin biosynthesis
cpf00541
Biosynthesis of various nucleotide sugars
cpf01055
Biosynthesis of vancomycin group antibiotics
cpf01100
Metabolic pathways
cpf01110
Biosynthesis of secondary metabolites
cpf01250
Biosynthesis of nucleotide sugars
Module
cpf_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CPF_0482 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CPF_0482 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CPF_0482 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CPF_0482 (rfbB)
00525 Acarbose and validamycin biosynthesis
CPF_0482 (rfbB)
Enzymes [BR:
cpf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CPF_0482 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
ABG82897
UniProt:
A0A0H2YPT8
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All DBs
Position
571045..572094
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AA seq
349 aa
AA seq
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MKTYLVTGGAGFIGSNFVLYMLKKYKDIKIINLDKLTYAGNLENLKSIENDERHIFVQGD
ICDKELVSSLFEKYEIDYVAHFAAESHVDRSIREPEVFAKTNVLGTVNLLNCAKNAWETE
EGWKEGVKFLHVSTDEVYGSLGETGYFMETTPLDPHSPYSSSKASSDLMVKAYADTYKMP
VNITRCSNNYGPFQFPEKLIPLLINNCLNHKDLPVYGDGMNIRDWLFVEDHAKAIDMVIN
GGRLGEVYNVGGHNERTNIQIVKTVIEYLHDNVDEEITENLIKYVEDRKGHDRRYGIDPT
KIKEELGWYPETTFEVGIKKTIKWYLDNKEWMENVTSGDYQKYYEKMYK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacttacttagttacaggtggagcaggatttataggatctaactttgtattatat
atgttaaagaaatacaaagatataaaaataataaacttagataaattaacttatgcagga
aatttagaaaacttaaaatcaatagaaaatgatgaaagacatatattcgttcaaggagat
atatgtgataaagaattagtttcaagtttatttgaaaaatatgagatagactatgtagct
cactttgcagcagaatcacatgttgatagaagtataagagagccagaagtatttgctaaa
actaatgtattaggaacagtaaatttacttaactgtgctaaaaatgcatgggaaacagaa
gaaggatggaaagaaggagttaaattcctgcatgtttcaacagatgaagtttatggttca
ttaggagaaacaggatatttcatggaaacaacaccattagatccacatagtccatattca
tcaagcaaagcaagttcagatttaatggttaaggcttatgcagatacatataaaatgcca
gtaaacataacaagatgttcaaataactatggaccattccaattcccagaaaaacttata
ccacttctaataaataactgtttaaatcataaggatttaccagtttacggagatggaatg
aatataagagactggttattcgttgaagaccatgcaaaagcaatcgatatggtaataaac
gggggaagacttggagaagtttacaatgttggtggacataatgaaagaactaacatacaa
atagtaaaaacagttatagaatacttacatgataatgtagatgaagaaataactgaaaac
ttaataaagtatgttgaagatagaaaaggtcatgatagaagatacggaatagatccaaca
aagataaaagaagagttaggatggtatccagaaacaacttttgaagttggaataaagaaa
acaataaaatggtacttagataataaagaatggatggaaaatgtaacatcaggagattat
caaaaatattatgagaagatgtataaatag
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