Clostridium perfringens ATCC 13124: CPF_0532
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Entry
CPF_0532 CDS
T00378
Symbol
nanJ
Name
(GenBank) sialidase
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf00511
Other glycan degradation
cpf00600
Sphingolipid metabolism
cpf01100
Metabolic pathways
cpf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
CPF_0532 (nanJ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
CPF_0532 (nanJ)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
CPF_0532 (nanJ)
Enzymes [BR:
cpf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
CPF_0532 (nanJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sialidase
F5_F8_type_C
BNR_2
BNR_3
F5_F8_type_C_2
fn3
BNR
Laminin_G_3
fn3_2
CBM_AftD
DUF5000
RGI_lyase
FN3_Tor_3rd
Motif
Other DBs
NCBI-ProteinID:
ABG84247
UniProt:
A0A0H2YT71
Structure
PDB
PDBj
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All DBs
Position
629171..632692
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AA seq
1173 aa
AA seq
DB search
MKSKKIIATLVASLVISNMGGYLVKANPNVNHKAVIIEDRQAIIETAIPQSEMTASATSE
EGQDPASSAIDGNTNTMWHTKWNGSDALPQSLSVNLGSSRKVSSIAITPRTSGNNGFITK
YEIHAINNGVEALVAEGTWEENNLVKTVTFDSPIDAEEIKITAIQGVGGFASIAELNVYE
IKGEVDEIANYGNLKITKEEERVNITGDLEKFSSLEEGTIVTRFNMNDTSIQSLIGLSDG
NKANNYFSLYVSGGKVGYELRRQEGNGDFNVHHSADVTFNRGINTLALKIEKGIGAKIFL
NGSLVKTVSDPNIKFLNAINLNSGFIGKTDRANGYNEYLFRGNIDFMNIYDKPVSDNYLL
RKTGETKAPLEDSLLPDDVYKTQPVELFYPGYLESRGYRIPALETTKKGTVLASIDVRNN
GDHDAPNNNIDVGIRRKEVNGEWEEGKVILDYPGKSAAIDTSLMSATIEENGIEKERIFL
IVTHFPEGYGFPNTEGGSGYREIDGKYYFILKDAQNNEYTVREDGIVYNSEGNQTDYVMK
NDKTLIQNGEEVGNALLSNSPLKAVGTAHIEMIYSDDDGKTWSEPEDLNPGLKKEWMKFF
GTAPGKGIQIKNGEHKDRLIFPIYYTNQNNFQSSAVIYSDDFGETWKLGESPIDTASVSS
ETVSSGTQLTECQVVEMPNGQLKLFMRNTGSYTRIATSFDGGATWHDEVPEDTSLREPYC
QLSVINYSGKINGKDAIIFSNPDASSRVNGSVKVGLINENGTYDNGEPRYEFDWIYNKTV
KPGSFAYSCLTELPDGNLGLFYEGEGAGRMAYTEFDLNYLKFNASEDSPSASVQSIEVLD
EDLAYNSGEEVSIKVNFNQLVSIIGDRKITLDIGGVDVPLNMVNYEGKSSAIFKGTIPEG
INQGNYEIKLKENNTLELNTVYNKVSTFNGLDNTGINVQIGELKTTVGNSTIKVNDEVQV
GSAFEAILGIEGLNGDTEVYSAEYLFEYNAEAFILNEITSFNDSLFVKSKEVEPGKVRIL
VASLGNEIEKDSDLVKVNLTPKISSELEVLGLTTALVGAGDGNTHDLELSSKEVKINEEA
SGEIVVNPVQNFEIPEINKKNVKLTWNAPITTEGLEGYVIYKDGKKLSEVPAESTEFVVS
KLNRHTIYNFKVAAKYSNGELSAKESKTIRTAR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtaaaaaaattatagctacgcttgttgcaagtttagttatttctaatatggga
ggatatttagtaaaagctaatcctaatgtaaatcataaggcagttattatagaagataga
caagctattattgaaactgctattccacaatcagaaatgacagctagtgcaacttcagaa
gagggccaagatccagcttcaagtgctattgatggaaatacaaatactatgtggcataca
aaatggaatgggagtgatgcgcttccacagagtttatcagtaaacttaggaagttctaga
aaagttagttctatagctattacaccaagaacaagtggaaacaatggatttataactaag
tatgaaattcatgctattaataatggagtggaagctttagttgcagagggaacctgggaa
gaaaataatttagttaaaactgtaacttttgattctcctattgatgcagaagagataaaa
ataactgcaattcaaggtgttggtggatttgcttcaatagcagagttaaatgtttatgaa
atcaaaggcgaagtagatgaaattgctaactatggaaacttaaaaataactaaggaggaa
gaaagggtaaatataacaggtgatttagaaaaattctcctcactagaagaaggaactata
gtcactagatttaatatgaatgatacctcaattcaaagtttaattggtttaagtgatgga
aataaagcaaataactatttttcactttatgtaagtggaggaaaagtaggatatgagctt
agaagacaagaaggaaatggagattttaatgtacatcacagtgcagatgttactttcaat
agaggaataaatactttagctttaaaaatagaaaagggaataggagctaagatattttta
aatggttctctggttaaaacggtatcagatccaaatattaaatttttaaatgcaataaat
cttaatagtggatttattggtaaaactgatagagcaaatgggtataatgagtatttattt
agaggaaatatagattttatgaatatttatgataaaccagtaagtgataattatttgtta
agaaaaacaggagaaactaaagcaccattagaagatagtttattgccagatgatgtttat
aaaacacaaccagtagaattattctatcctggatatttagaatcaagaggatatagaatt
cctgctttagaaacaactaaaaaaggaacggttttagcttctatagatgttagaaataac
ggagatcatgatgctcctaataataacatagatgtaggtataagaagaaaagaagtaaat
ggagaatgggaagaaggaaaagtaatattagattatccaggtaaatcagcagctatagat
acttctcttatgtcagctaccatagaagagaatggaattgaaaaagagagaatatttctt
atagtaactcatttcccagaaggttatggattccctaatacagagggtggaagtggatat
agagaaattgatggaaaatattattttatattaaaagatgctcaaaataatgaatataca
gttagagaagatggaattgtttataattcagaaggaaatcaaactgattatgtaatgaaa
aatgataaaacccttattcaaaatggagaagaagttggaaatgccttactaagcaattct
ccacttaaggcagttggaactgctcatattgaaatgatttatagtgatgatgatggtaag
acatggagtgaaccagaggatttaaatccagggcttaagaaagaatggatgaaattcttt
ggaactgcaccaggaaagggaattcaaataaaaaatggagagcataaagatagattaata
ttcccaatatactatactaatcaaaataatttccaatcaagtgctgtaatttatagtgat
gactttggtgaaacttggaagttgggagaatctccaatagatacagcttctgtaagctct
gaaacagtttcttcaggaacacagttgacagagtgccaagtagttgaaatgccaaatgga
caactaaaattatttatgagaaatactggttcatatacaagaattgcaactagttttgat
ggaggagcaacatggcatgatgaagttccagaagatacttctttaagagagccttattgt
caattaagtgttataaattatagtggaaaaataaatggtaaagatgcaattatattctca
aacccagacgcaagtagtagagtaaatggaagtgttaaggttggcttaataaatgagaat
ggaacttatgacaatggagaaccaagatatgaatttgattggatttataataagacagtt
aagccaggttcatttgcttattcttgtttaacagagttaccagatggaaacctaggatta
ttttatgagggtgaaggggcaggcagaatggcatatactgaatttgatttaaattacctt
aagtttaatgcttctgaagattcaccatcagcttcagttcaatcaattgaagttttagat
gaagatttagcttacaattctggagaggaagtttcaataaaagtaaactttaatcaatta
gttagtatcataggagatagaaagataactttagatataggtggagtagatgtaccacta
aatatggttaattatgaagggaagagctcagctatatttaaaggaactataccagaagga
attaatcaaggaaattatgaaataaagcttaaagaaaataatactttagaacttaatact
gtttataataaagtttcaactttcaatggattagataatacaggaattaatgtacagatt
ggtgaattaaaaacaactgttggaaattcaaccataaaggttaatgatgaagttcaagtt
ggctcagcatttgaagctatattaggaattgaaggattaaatggagatacagaagtgtat
tcagcagaatatttatttgagtataatgcagaagcatttatattaaatgaaattacttca
tttaatgattctttatttgtaaagagtaaagaagttgaaccaggaaaagttagaatatta
gtagcttctttagggaatgaaatagaaaaagattcagatctagtaaaagttaacttaact
ccaaagatttcttctgaattagaagttttaggattaacaacagctttagtaggagctgga
gatggaaatactcatgacttagaactttcaagtaaggaagttaaaattaatgaagaagct
tcaggagagatagtagtaaatccagtacaaaattttgaaattccagaaataaataagaaa
aatgttaaattaacatggaatgctccaataacaactgaggggttagagggatatgtaata
tataaagatggaaagaaattatcagaagttccagctgaatctacagagtttgtggtttca
aaattaaatagacatactatttacaattttaaagtggcagctaaatattcaaatggagaa
ctttcagctaaagaaagtaagactataagaactgctaggtaa
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