Clostridium perfringens ATCC 13124: CPF_0538
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Entry
CPF_0538 CDS
T00378
Name
(GenBank) glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein
KO
K05845
osmoprotectant transport system substrate-binding protein
K05846
osmoprotectant transport system permease protein
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CPF_0538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpf02000
]
CPF_0538
Transporters [BR:
cpf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
CPF_0538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
BPD_transp_1
Band_3_cyto
Spore_Cse60
RMD1-3
OSTMP1
Arteri_Gl
Motif
Other DBs
NCBI-ProteinID:
ABG83933
UniProt:
A0A0H2YTQ8
LinkDB
All DBs
Position
639643..641196
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AA seq
517 aa
AA seq
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MNSLLQYVISQKTQILDLLVQHIYLTITAIGIAILIGVPLGILVSRVKFLRKPIIGFVNL
VQAVPSMALLGLLIPILGIGSTPAIFMVVVYSLLPIVKNTYTGISGIDPVVLESAKGIGL
TKNQSLFKIQLPLALPIIMSGIRISAVTAVGLMTLAAFIGAGGLGYLVFSGVQTVNNNMI
LAGAIPACILALIVDFIFGKIEVAVTPKGLSNDNKKKNTFVLKIISVIMIIAILFMGISS
FISSKKDKVVIGSKNFTEQLILGNMYADLVQDKTDLQVEKKLNLGGTSVAFGALEKGDVD
MYVDYTGTLLVNVMKENNIDNSVDYYNSIKENMNKEHGLTVMEPLGFNNTYNIAISKELA
DKYKINTISDLSKYSNDFVLSPTIEFQNRQDGLVGLKNYYGMDFKNVKSLDGSLRYSALS
NGESQAIDAFSTDGLLKKFDLKTLEDDKKFFVNYSAVPIVNNKTLEKYPQLKDVLNSLSG
KINEEKMIDLNYEVDVLGKSPEEVAKAFLIREGLIEQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttgaatagtttattacaatatgtaatttcacagaaaactcaaatattagatttattagtt
caacatatatatttaacaattacggctataggaatagctatattaataggagttccttta
ggaattcttgtttcaagggttaagtttttaagaaagcctataataggatttgtaaactta
gtacaagctgtgccttctatggccttactaggattgcttattcccatattaggaatagga
agtacacctgcaatctttatggttgtagtatattcattgcttccaatagttaaaaatact
tacacaggaatctctggcatagacccagtagtattagaatctgctaagggaattggactt
actaagaaccaaagtttatttaagatacaattaccattagcattgccaataataatgtct
ggtataagaatatcagcagttacagccgtagggcttatgactttagcagcctttattggt
gccggtggacttggatacttagtattctcaggagttcaaacggtaaataataatatgatt
ttagcaggagctataccagcttgtattttagccttaatagttgactttattttcggaaaa
atagaggtagctgttacaccaaagggattaagtaatgataacaaaaagaaaaatactttt
gttcttaaaataataagtgtaataatgataatagctattttatttatgggaatttcatca
tttatatcaagtaaaaaagataaagtggttattggatcaaaaaactttactgagcaactt
attttaggaaatatgtatgcagatttagttcaggataaaacagatttacaagttgaaaaa
aagctaaatctaggaggaacatcagttgcctttggagcacttgaaaaaggtgatgttgac
atgtatgttgattatactggaacattacttgttaatgttatgaaagaaaataatattgat
aatagtgtagattattataatagcataaaagaaaatatgaacaaggaacatgggttaaca
gtaatggaacccctaggttttaataatacttataatatagctatatcaaaagaattagct
gataagtataagataaatacaatatcagatttatcaaagtacagtaatgactttgtatta
tctccaactattgagttccaaaatagacaagatggtttagttggattaaagaattactat
ggcatggatttcaaaaatgttaaatctttagatggaagtcttagatactcagcattatca
aatggggaatcacaggctatagatgctttctcaacagatggacttcttaaaaagtttgat
ttaaaaactttagaagatgataagaaattctttgtaaattatagtgcagtacctatagtt
aacaataagactttagaaaaatatccacaattaaaggatgttttaaactctttaagtggt
aagatcaatgaagaaaaaatgattgacttaaactatgaagtagatgtattaggtaaatca
ccagaagaggttgctaaagctttcttaattagagaaggtttaatagaacaatag
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