Clostridium perfringens ATCC 13124: CPF_0548
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Entry
CPF_0548 CDS
T00378
Symbol
ribA
Name
(GenBank) riboflavin biosynthesis protein RibA
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf00740
Riboflavin metabolism
cpf00790
Folate biosynthesis
cpf01100
Metabolic pathways
cpf01110
Biosynthesis of secondary metabolites
cpf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
CPF_0548 (ribA)
00790 Folate biosynthesis
CPF_0548 (ribA)
Enzymes [BR:
cpf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
CPF_0548 (ribA)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
CPF_0548 (ribA)
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Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
ABG82360
UniProt:
A0A0H2YNK2
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All DBs
Position
653875..655074
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AA seq
399 aa
AA seq
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MKKFNLVEEAIEDIKNGKMVIVIDDEGRENEGDLVMAGELVTGEKINFMATYGKGLICAP
VSERIAENLGLNPMVLNNTDNHETAFTVSIDYKDTTTGISAFERAHTIKELINEESKAED
FRRPGHVFPLIAKNGGVLKRAGHTEAAIDLAKLAGLKEVGVICEIMKDDGTMARTDELLE
FANSHNMKIITIEDLIAYRTERDNFVYRVVETNMPTKYGEFKAIGFIDKLTGEHHVALVK
GEIKSEEPVLLRVHSECLTGDVFGSRRCDCGEQFHRAMEKINEEGKGILLYMRQEGRGIG
LINKLKAYKLQDEGLDTVEANIALGFPEDLRDYGVGAQILKELSVREIRLMTNNPKKITG
LEGYGLKIVERVPIEIKCNEENEFYLKTKKEKMHHLIMQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatttagtagaagaggcaatagaagatataaaaaatgggaaaatggtt
attgttattgatgatgagggaagagaaaatgagggggatctagttatggctggagaactt
gttactggagaaaaaataaattttatggctacttatggaaagggtttaatatgtgctcca
gtaagtgagaggatagctgaaaatttaggattgaatcctatggttttaaataatacagat
aatcatgaaactgcctttacagtatctatagattataaagatacaactacaggaatatca
gcctttgaaagggctcatacaattaaagaattaataaatgaagaaagtaaagcagaggat
tttagaagaccaggacatgtattccctttaatagctaagaatggtggcgttttaaagaga
gctgggcatacagaggcggcaattgacttagcaaagttagctggattaaaagaagttggg
gtaatatgtgaaataatgaaagatgatggaactatggctagaactgatgaattattagaa
tttgcaaatagtcataatatgaaaataataactatagaagatttaattgcttatagaaca
gaaagagataattttgtttatagagttgttgaaactaatatgccaactaaatatggagag
ttcaaggctattgggtttatagataaacttacaggagagcatcatgtggctttagttaaa
ggagagataaaatcagaggagccagtattattaagagtgcattcagaatgcttaactgga
gatgtttttggatcaagaagatgtgattgcggagagcagtttcatagggctatggaaaaa
ataaatgaagagggaaaagggatattactttatatgagacaagaaggaagaggaataggt
cttataaataagttgaaagcttataagcttcaagatgaaggattagatactgtagaagct
aatatagctttaggatttccagaagatcttagagattatggcgttggagcacaaatttta
aaagagttaagtgtaagggaaatcaggttaatgactaataatcctaaaaaaataactggc
ttagagggatatggacttaaaatagtagaaagagtacctatagaaataaagtgtaatgag
gaaaatgagttttatttgaaaactaagaaagagaaaatgcaccatttaataatgcagtaa
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