Clostridium perfringens ATCC 13124: CPF_0871
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Entry
CPF_0871 CDS
T00378
Name
(GenBank) transposase, IS605 OrfB family
KO
K07496
putative transposase
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CPF_0871
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Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
HTH_OrfB_IS605
C1_2
Motif
Other DBs
NCBI-ProteinID:
ABG84418
UniProt:
A0A0H2YUW9
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Position
complement(1034911..1036083)
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AA seq
390 aa
AA seq
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MKKLKKAYKMEINPTDKQKSKIHRTIGVSRFIYNFYIARNKEIYEREGKFVSGMDFSKWL
NNEYIPNNQEMKWIKEVSSKATKQAIMNGDKSFRDFFKKAKGFPKFKKKKNQDVKAYFPK
NNKTDWTIERHRVKIPTLGWIRLKEFGYIPVNSIVKSGTVSQKADRYYVSILVEETDIKI
SNPNNAGVGIDLGIKEFAVCSDGIKFKNINKTSTVKKVEKKLKREQRKLSRKYESLKIRN
KNIKEGRATRQNIQKQIIKVQKLHQRLTNIRTDYINKIVSSIIKQKPSYITIEDLNVKGM
MKNKHLSKAIASQKFFEFKTKLTVKCKENHIELRIVDRFYPSSKTCSQCGKVKKDLKLSD
RIYKCDCGFTIDRDLNASINLKNAKEYKIA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttgaaaaaggcatacaagatggagattaatcctactgataagcaaaaatct
aaaatacaccgaactattggtgtatcaagatttatatataatttctacattgctcgtaat
aaagaaatttacgagagagaaggaaagtttgttagtggaatggatttttcaaagtggtta
aataatgaatatattcctaataatcaagaaatgaagtggattaaagaagtatcttcaaaa
gctactaaacaagctattatgaatggagataaatcttttagagatttctttaaaaaagct
aaaggctttccaaaatttaaaaaaaagaaaaatcaagatgtaaaagcttattttcctaag
aataataagactgattggactattgaaaggcatagagtcaaaataccaactttaggatgg
ataagattaaaagaatttggttatattcctgtaaattcaatagtcaaaagtggtacagta
agtcaaaaagctgatagatattatgtatctatattggttgaagaaacagatataaaaata
tctaatcccaataatgcaggcgtaggaattgatctaggtattaaggaatttgctgtatgt
agtgatggaattaagtttaaaaatataaataaaacatctactgttaaaaaagtagaaaag
aaattaaaaagagagcaaagaaaactttcaagaaaatatgaaagtttaaaaataagaaat
aaaaatataaaagaagggagagctactcgtcaaaatattcaaaaacaaataatcaaagta
caaaaacttcatcagagattaacaaatatacgaactgattatataaataaaatagtatct
tcaattataaagcaaaaaccaagctatataacaattgaagatttaaatgttaaaggaatg
atgaagaataagcatttatctaaagctattgcaagtcagaagttctttgaatttaaaact
aagttaacagttaaatgcaaagaaaatcatatagaacttagaatagtggatagattttat
ccatcatcaaagacttgtagtcaatgtggaaaggttaagaaagatttaaaactatcagat
agaatttataaatgcgattgcggatttactattgatagagatttaaacgcaagtattaat
cttaaaaatgctaaagaatataagatagcttaa
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