Clostridium perfringens ATCC 13124: CPF_0875
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Entry
CPF_0875 CDS
T00378
Name
(GenBank) putative O-GlcNAcase nagJ
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
cpf
Clostridium perfringens ATCC 13124
Pathway
cpf01100
Metabolic pathways
cpf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
CPF_0875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
cpf02042
]
CPF_0875
00536 Glycosaminoglycan binding proteins [BR:
cpf00536
]
CPF_0875
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cpf00537
]
CPF_0875
Enzymes [BR:
cpf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
CPF_0875
Bacterial toxins [BR:
cpf02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
CPF_0875
Glycosaminoglycan binding proteins [BR:
cpf00536
]
Heparan sulfate / Heparin
Enzymes
CPF_0875
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cpf00537
]
Enzymes
CPF_0875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAGidase
NagJ_C
F5_F8_type_C
Glyco_hydro_20b
F5_F8_type_C_2
Glyco_hydro_84_hel
Glyco_hydro_67N
Glycohydro_20b2
Nuc_rec_co-act
DUF4175
Motif
Other DBs
NCBI-ProteinID:
ABG84510
UniProt:
A0A0H2YTZ1
Structure
PDB
PDBj
LinkDB
All DBs
Position
1038706..1042596
Genome browser
AA seq
1296 aa
AA seq
DB search
MIKRDFRKKLTMCLASVMALNLGISVSVKADEGLKNEIKNNDITKDISIYPTPKDMTVGN
SEFTLEDSVNIVGGDLADTYAFELLKNMLTEFGIKINESEIEGATTIYIGESDDNIEEME
NTLEEMNVDTSSISKDEGYVLVTDENTEGNKIVIRGNDETGTFYGVKSLKQLIKKEDNKV
ILDEVVIKDEPSFKMRAVVEGFYGTPWSQEERLDQIKMYGEYKMNAYIYAPKSDPYHREK
WREPYPASELDRMKELIKTANENKVDFVFAISPGLDIKFEGEEGEADFKALINKAETLYD
MGVRSFAILWDDIENRSGVQQAEVLNRFNKEFIKNKEGVKPLITVPVEYWGSSMFNGEEV
KTYTKEFAETLDKDIEVMWTGNDVIPPNGVSLEDAKKVSNVYNRKMMLWWNYPVNDYKED
KMALGPIYDLDRNLDEEVSGFIVNPMRFSDASKISTLTGADYGWNSVSYEAEKSWDKAIE
IIAGEMKEEFKIFANHSTRLDTGRPDSPEIKNTIDSLWEKWEAGSDISLELSNLQNEFSK
MVQVPNKLRSNLENKALLNQLDSHLSKFEIYGNAGLKSIEILQDIVNKDMSEFWSDNFEG
IKLLRNLDGIKATIANNVVDPFIRKVHEVGNEYFNKETTVLEEKEYSYTSIGNIADHKYS
EWFISEETHVPNYMFDDKDNTGFWSAAPVQKDEFIGFDLGEAEEIKDIYLLMGRNNNDTD
VLTNGVIEYSLDGENWTELEVNKGERELLVETGIKARFIRYRALSDSENKLYVRDFKVNT
GKSKEKLIGNVEVKDSNINKSSEGENEIISASNINKISFEEGDSIGLAINDVKNVIGFEV
LGDVESNKFVLESSFDNIEWEEVCNGTSFKDETPLVGKFFRIRAKEKTEANINEIKISLE
GYSKGIVSTNRRISSNANIHPDFVADNDYGTSFVCSDTIKKGDFVQLDLGVEKKIRDISL
VQGPGGDYMDGDIEYSLDGENWTKLGVVEGTDTLIKDLDVKARYVRVISTGYKDRWSRVR
EFTVNKTVKEFETKATSEGTYTDRSENIRDNNLNSAYIPEGEIKSGDYLLRRIFNERLVS
KVTVAQSTDNLSGAKVIGKTVNGETLDLGVLDKGLNELVLKNPRQLVSVKLVWEKDAGKV
EIFEVKPTFVSLDSIIEDIKNEIQRGKDILVENKDKKNEERTQLEEALKNIENLLNNKAS
DDEIVRAYEDLTNKINNFIDSESNKEENKPSKPEGGENGSEGEGDKEDSGDKNENEDNKD
ENGNLPNTGSPLGAGELMLVGAALATLGGVTIKKKK
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaagggattttagaaaaaagttaactatgtgtttagcatctgttatggcttta
aacctaggtataagtgtatcggtaaaagctgatgagggattaaaaaatgagattaagaat
aatgatattactaaagatataagtatatatccaactcctaaggatatgactgtaggaaat
agtgaatttaccttagaagattcagttaatatagttggaggagatttagcagatacatat
gcctttgaacttttgaaaaatatgttaactgaatttggcataaaaattaatgaatcagaa
attgagggggctactactatttatataggagagagcgatgacaatattgaagagatggaa
aatacattagaagaaatgaatgtagacacatcttcaataagcaaagatgagggctatgta
ttagtaactgatgaaaatacagagggaaataaaatagttataagaggaaatgatgaaaca
ggaactttttatggggtaaaaagtttaaagcaattaattaaaaaggaagataataaggtt
atcttagatgaagttgttataaaagatgagccgagttttaaaatgagagctgtagttgaa
ggtttctatggaacaccatggtctcaagaggaaagattggatcaaataaaaatgtatgga
gaatataaaatgaatgcttatatatacgctccaaagtcagatccatatcatagagaaaag
tggagagagccttatccagcttctgaattagatagaatgaaagaacttataaaaacagct
aatgaaaataaggttgattttgtttttgcaatatcaccaggtttagatataaagtttgag
ggagaagagggagaagcagattttaaagctttaataaataaagcggagactctatatgat
atgggagttagaagctttgcaattctttgggatgatatagagaatcgtagtggagttcaa
caagcagaagttttaaatagatttaataaagaatttataaaaaataaagaaggggttaag
ccattaataactgtcccagtagaatattggggaagctcaatgtttaatggagaagaggta
aagacatatactaaagaatttgcagaaactttagataaggatattgaagtaatgtggaca
ggaaatgatgtaattcctccaaatggagttagcttagaggatgcaaagaaggtttcaaat
gtatataatagaaaaatgatgttatggtggaattatcctgttaatgattataaagaggat
aaaatggctttaggaccaatatatgatttagatagaaatttagatgaggaagtgtcagga
ttcatagttaatcctatgagattttctgatgcatcaaagatttccacattaacaggagct
gattatggatggaattcagtttcatatgaagcagaaaaatcatgggacaaagctattgaa
attattgcaggagaaatgaaagaagaatttaagatttttgctaatcattcaactagatta
gatacaggaagaccagattcaccagagattaaaaatactatagatagcttatgggaaaag
tgggaagcaggttctgatattagtttagaattaagtaatttacaaaatgagttttctaaa
atggttcaggtaccaaataaattaagaagtaatttagaaaataaagctttattaaatcaa
ttagattcacacttatcaaagtttgagatttatggaaatgctggacttaaatccatagaa
atattacaagatatagtaaataaggatatgtcagagttctggagtgataattttgaagga
ataaaacttcttagaaatttagatggaataaaagccacaattgctaacaatgtggtggat
ccatttataagaaaagtccatgaagttggaaatgaatatttcaataaggaaactactgtt
ttagaggagaaggaatattcttatacatcaattggaaatattgctgaccataaatattca
gaatggtttatttctgaagaaacgcacgttccaaattatatgtttgatgataaagataat
acaggcttctggtcagcagcaccagtacaaaaggatgagttcataggatttgatttaggt
gaagctgaagagattaaagacatatatcttcttatgggaagaaataataatgatacagat
gttttaacaaatggagtaatagagtattcattagatggagaaaattggacagagttagaa
gttaataagggagagagagaattactagttgaaacaggaataaaagctagatttataaga
tatagagctctttcagactctgaaaataagttatatgttagagattttaaagttaatact
ggaaagagtaaggaaaaattaataggaaatgtagaagttaaagactcaaatattaataag
tcttcagagggagaaaatgaaattatatctgcaagtaatataaataagatttcctttgaa
gagggagattctataggacttgctataaatgatgttaaaaatgtaattggatttgaagtc
ttaggagatgtagaaagtaataaatttgtattagaaagttcctttgataatatagagtgg
gaagaagtttgcaatggaactagctttaaagatgagactcctttagtaggaaagttcttt
agaataagagcgaaggaaaaaactgaagctaatattaatgaaattaagatttcattagaa
ggatattctaagggaatagtttcgacaaatagaagaataagctcaaacgcaaatatacat
cctgattttgttgctgataatgattatggtacatcttttgtatgctcagatactattaaa
aaaggtgactttgtacaattagatcttggggtagaaaagaaaattagagatataagctta
gttcaaggaccaggcggagattatatggatggagatattgagtattctttagatggagaa
aattggacaaagttaggtgttgtagaaggaactgataccttaataaaagatttagatgta
aaagctagatatgttagagttatttcaactggatataaggatcgttggtctagagttaga
gaatttactgtaaacaaaacagtaaaagaattcgagactaaggctacttcagagggaact
tatacagatagaagtgagaatataagagataataatttaaattctgcatatataccagaa
ggtgaaattaagagtggagattatcttctacgtagaatttttaatgagagactagtttca
aaagttacagttgctcagagtacagataatttatcaggagcgaaagttattggaaagact
gtaaatggagaaactttagaccttggagtattagataagggattaaatgagcttgttctt
aagaatccaagacaattagtatctgtaaagttagtgtgggaaaaagatgctggaaaggtg
gaaatctttgaagtaaaacctacctttgtatctttagattctataattgaagatattaaa
aatgaaattcagcgtggaaaagatattttagttgagaataaagataaaaaaaatgaagaa
agaactcagttagaagaagcattaaaaaatattgagaatttattaaataataaagcttca
gatgatgagattgtaagagcatatgaggatttaacaaataaaataaataactttattgat
tcagagtcaaataaagaagagaataagccaagtaaaccagaaggtggagaaaatggttct
gaaggtgaaggagacaaagaagactctggagataagaatgaaaatgaagataataaggat
gagaatggaaatcttccaaacactggatcacctttaggagcaggtgagttaatgctagta
ggtgcagctttggctacacttggaggagtaactattaaaaagaaaaagtaa
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