Clostridium perfringens ATCC 13124: CPF_0939
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Entry
CPF_0939 CDS
T00378
Name
(GenBank) RecT family protein
KO
K07455
recombination protein RecT
Organism
cpf
Clostridium perfringens ATCC 13124
Brite
KEGG Orthology (KO) [BR:
cpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpf03400
]
CPF_0939
DNA repair and recombination proteins [BR:
cpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CPF_0939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecT
Motif
Other DBs
NCBI-ProteinID:
ABG84594
UniProt:
A0A0H2YU14
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All DBs
Position
1095516..1096385
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AA seq
289 aa
AA seq
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MATASSLKNQLAKKGTGNSLSVGNTVKGLMDSPTIKKRFEEVLNEKAPQYMSSIVNLVNS
DTNLQKCEGMSVIASCMVAATMDLPVDKNLGYAWVVPYGNRAQFQMGYKGYIQLALRTGQ
YKSINVVEIREGELVSWNPLTEEIEVDFSKRESDAVIGYAGYFKLINGFEKTVFWTKEEV
NNHANKFSKTVNSKNSVWKSNFDAMAKKTVLRNLLSKWGILSIEMQKAYTADENLINKGL
MDDIENVQANIEGIQENNENEGVIEADYTVDSNNEVLEGQQDIFEGASL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcatcaagtttaaaaaatcaattagcaaagaagggaactggtaatagttta
tcagttggaaatacagttaaaggattaatggatagtccaactataaagaaaaggtttgaa
gaggtattaaatgaaaaggcacctcaatatatgagttcaatagttaacttagttaattca
gatactaacttacaaaaatgtgaaggaatgagtgtaatagcaagttgtatggtagcagca
acaatggatttaccagtggataagaatttagggtatgcatgggtagtcccatatggtaat
agagctcaatttcaaatgggttataaagggtatattcaattagcattaagaacaggtcaa
tataagtctataaatgtagttgaaataagagaaggcgaattagtttcatggaatccatta
acagaagaaattgaggttgactttagcaaacgtgagagcgatgcagtaattggatatgca
ggatattttaaattaataaatggatttgaaaagacagtattctggaccaaagaagaagtt
aataatcatgctaataaattttcaaagacagttaattcaaaaaattctgtttggaaaagc
aactttgatgcgatggccaagaaaacagttctaagaaacctactatctaaatggggaatt
ttaagtatagaaatgcaaaaagcatatacagcagatgaaaacttaattaataaaggtcta
atggatgatatagaaaatgtacaagctaacattgaaggtattcaagaaaacaatgagaat
gaaggtgttattgaagctgattatacagttgatagtaacaatgaagtgcttgaagggcaa
caagatatatttgaaggagcatcattataa
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